Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RNU6-761P-201ENST00000384148 107 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AL139098.1-201ENST00000407291 389 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC006548.1-201ENST00000427470 102 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 RPL23AP22-201ENST00000437556 453 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC115115.1-201ENST00000449927 248 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC104073.1-201ENST00000451988 151 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 RPL21P10-201ENST00000463521 490 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC010301.1-201ENST00000473936 355 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC112206.4-201ENST00000515142 405 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC011611.1-201ENST00000552179 197 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC090116.1-201ENST00000615679 446 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 CR381572.1-201ENST00000625098 102 ntBASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 RNU6-805P-201ENST00000365643 106 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 RNU6-207P-201ENST00000384137 107 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 MIR591-201ENST00000385290 95 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AL355615.1-201ENST00000406187 641 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 RNA5SP293-201ENST00000410527 113 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC063979.1-201ENST00000415539 377 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 KRR1P1-201ENST00000419430 803 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC006960.1-201ENST00000419980 153 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC005300.1-201ENST00000428401 373 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 SETP5-201ENST00000437270 562 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 NPM1P13-201ENST00000452663 865 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 RPS24P6-201ENST00000452670 400 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 MTCO3P2-201ENST00000457365 171 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC104629.1-201ENST00000494226 508 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC016550.1-201ENST00000505348 785 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 MTCO2P32-201ENST00000514865 403 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AP001207.2-201ENST00000519490 539 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 IGHV3-76-201ENST00000522465 295 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC093519.1-201ENST00000566109 298 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC010735.1-201ENST00000567305 1026 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 GAS5-AS1-201ENST00000602767 694 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AL159169.3-201ENST00000608871 561 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC073968.1-201ENST00000618594 637 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AP000943.4-201ENST00000622912 357 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC068880.4-201ENST00000623082 495 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC092184.1-201ENST00000625042 715 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 ZNF542P-204ENST00000482727 1305 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AC130650.2-201ENST00000618736 2403 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 AL672296.1-201ENST00000427780 2158 ntBASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCSER1Q9C0I3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RNA5SP295-201ENST00000362655 121 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 SNORA63.3-201ENST00000362682 132 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AL583834.1-201ENST00000406943 343 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RPL23AP47-201ENST00000408017 460 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RNA5SP120-201ENST00000410900 112 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RNU4-78P-201ENST00000410940 126 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 TOMM22P1-201ENST00000418578 312 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 SFR1P2-201ENST00000421841 730 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 HMGN2P16-201ENST00000456802 261 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RN7SL807P-201ENST00000470923 297 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AC092902.1-201ENST00000486999 259 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AC011352.3-201ENST00000505162 593 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 MTCO3P44-201ENST00000510977 541 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 RNA5SP217-201ENST00000515959 91 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms