Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 RPL36AP6-201ENST00000435770 321 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 RPL7P52-201ENST00000449200 742 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC146507.1-201ENST00000468335 354 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 RPS20P22-201ENST00000473700 357 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 MIR4524B-201ENST00000581569 115 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 PCNAP1-202ENST00000595299 752 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC005021.1-201ENST00000608730 355 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 AP005212.4-201ENST00000614206 710 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC022079.2-201ENST00000619739 566 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM4Q9C037 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM4Q9C037 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 AL035425.3-201ENST00000564206 4996 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 SNORA7.2-201ENST00000364446 145 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC092638.1-201ENST00000411966 1275 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM4Q9C037 RAD23BP2-201ENST00000416003 1207 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 HMGB1P18-201ENST00000438801 619 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM4Q9C037 RPS17P11-201ENST00000474297 293 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM4Q9C037 RPL21P131-201ENST00000497298 483 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC021146.7-201ENST00000509604 775 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 SNORA31.15-201ENST00000516771 132 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 RNU6-711P-201ENST00000517255 106 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AP001207.1-201ENST00000524051 481 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM4Q9C037 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC004486.1-201ENST00000546846 233 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC090695.1-201ENST00000561269 1222 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 HMGB1P6-201ENST00000569046 646 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC113368.1-201ENST00000603736 382 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AL390240.1-201ENST00000612950 384 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC105227.2-201ENST00000615075 605 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AP000676.4-201ENST00000624659 623 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 AC079228.1-201ENST00000624774 1049 ntBASIC2.97□□□□□ -1.93
TRIM4Q9C037 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM4Q9C037 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM4Q9C037 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM4Q9C037 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM4Q9C037 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM4Q9C037 RPL31P1-201ENST00000398116 372 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 AL590004.2-201ENST00000404787 371 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 AC241520.1-201ENST00000422654 1099 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 AL157827.1-201ENST00000447622 132 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 NCOR1P1-202ENST00000486162 291 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 AC138761.3-201ENST00000579993 334 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 AC015849.2-201ENST00000605738 409 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 HMGN2P28-201ENST00000606102 262 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 MTCO1P8-201ENST00000416914 1523 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM4Q9C037 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM4Q9C037 AC087565.3-202ENST00000642085 1603 ntBASIC2.96□□□□□ -1.94
TRIM4Q9C037 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM4Q9C037 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 Z82195.2-201ENST00000612348 18351 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 RNU6-600P-201ENST00000362524 99 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 EEF1A1P41-201ENST00000414667 207 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 MTCYBP12-201ENST00000440559 1134 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 RPL29P29-201ENST00000448725 423 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AP000705.1-201ENST00000454567 350 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC104629.2-201ENST00000468627 598 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 RNU6-1004P-201ENST00000516584 111 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC067904.2-201ENST00000517322 1283 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC025881.1-201ENST00000518851 512 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 COX6CP8-201ENST00000522620 226 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 OR8L1P-201ENST00000534005 955 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 H3F3AP1-201ENST00000559984 334 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 MIR548Y-201ENST00000582739 110 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC245128.3-201ENST00000594721 748 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 AC096947.1-201ENST00000603233 470 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms