Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC092470.1-201ENST00000546187 132 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AL138976.2-201ENST00000563989 694 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC005261.5-201ENST00000596280 355 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 NRBF2P5-201ENST00000603087 788 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC055876.5-201ENST00000605667 259 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC093788.1-201ENST00000609356 927 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AC022106.2-201ENST00000620114 757 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AP001005.3-201ENST00000622049 129 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 AP006248.2-201ENST00000623309 592 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 MIR7641-1-201ENST00000627518 61 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 NEAT1-202ENST00000501122 22743 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.56□□□□□ -1.68
NDC1Q9BTX1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.56□□□□□ -1.68
NDC1Q9BTX1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC009643.2-201ENST00000603543 1448 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC092125.1-201ENST00000562568 1995 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 FRG1BP-201ENST00000278882 761 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RNA5SP505-201ENST00000364748 108 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 Y_RNA.279-201ENST00000364763 95 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RNU6-178P-201ENST00000384631 104 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RPL23AP32-201ENST00000395315 459 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RPL12P34-201ENST00000424532 479 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL353777.1-201ENST00000425552 326 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL035410.1-201ENST00000427409 427 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RPL7P54-201ENST00000438336 674 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC093019.1-201ENST00000443135 252 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL513533.1-201ENST00000453728 415 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 CYCSP34-201ENST00000458172 304 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RPL7P15-201ENST00000461190 712 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RN7SL354P-201ENST00000469282 294 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 RPL5P22-201ENST00000480199 884 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 MTCO2P30-201ENST00000503662 364 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC093677.1-201ENST00000514414 678 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 MIR5699-201ENST00000578903 90 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC044792.1-201ENST00000593294 196 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC068790.5-201ENST00000602741 355 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL162413.1-201ENST00000603198 110 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC008745.1-201ENST00000604064 271 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC007621.1-201ENST00000604544 437 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 MIR8069-1-201ENST00000616627 86 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC009159.1-201ENST00000618386 642 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 MIR8069-2-201ENST00000621412 86 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL136221.1-201ENST00000621449 509 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 FER-210ENST00000628534 558 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AL442639.1-201ENST00000625030 1899 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NDC1Q9BTX1 SMG1P6-201ENST00000532337 2930 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC107027.3-201ENST00000565095 3473 ntBASIC4.55□□□□□ -1.68
NDC1Q9BTX1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AC104260.2-201ENST00000623551 3497 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AC079741.1-201ENST00000321498 212 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL590240.1-201ENST00000334118 313 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 UBBP2-201ENST00000376781 231 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 RNU6-908P-201ENST00000410160 94 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 RSU1P3-201ENST00000412878 835 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL592293.2-201ENST00000422292 996 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms