Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 CYCSP35-201ENST00000451978 304 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 RPL21P134-201ENST00000453468 483 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 RPL7L1P8-201ENST00000469911 741 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 SETP11-201ENST00000473027 690 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC011825.1-201ENST00000484967 388 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MEIS3Q99687 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.24□□□□□ -1.73
MEIS3Q99687 AC112198.1-201ENST00000505369 1220 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 FCF1P8-201ENST00000510322 597 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 RNU6-720P-201ENST00000516363 108 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 DUXAP2-201ENST00000519198 589 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC109635.6-201ENST00000525487 1113 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 AC002400.1-201ENST00000569310 726 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 MTND1P15-201ENST00000579262 949 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 BNIP3P30-201ENST00000601184 574 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.24□□□□□ -1.73
MEIS3Q99687 AC131235.4-201ENST00000609288 620 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC069200.1-201ENST00000609511 323 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC025588.4-201ENST00000615802 908 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC009878.1-201ENST00000621819 340 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 AC024595.1-201ENST00000623088 387 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.24□□□□□ -1.73
MEIS3Q99687 AC116618.1-201ENST00000634617 774 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 MIR4278-201ENST00000636094 69 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
MEIS3Q99687 AC073055.1-201ENST00000456901 1621 ntBASIC4.24□□□□□ -1.73
MEIS3Q99687 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AL391994.1-201ENST00000254724 282 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 METTL21EP-201ENST00000298105 713 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 RNU1-70P-201ENST00000362618 164 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 RNU6-707P-201ENST00000364647 95 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 RNU5A-2P-201ENST00000384337 116 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 DEFB108C-201ENST00000400154 252 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 RN7SKP142-201ENST00000411236 328 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.23□□□□□ -1.73
MEIS3Q99687 MTCYBP5-201ENST00000423752 1135 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC017083.1-201ENST00000428093 483 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.23□□□□□ -1.73
MEIS3Q99687 RPS26P40-201ENST00000435209 294 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 BMI1P1-201ENST00000445879 941 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 KATNBL1P6-201ENST00000453433 915 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.23□□□□□ -1.73
MEIS3Q99687 HSPE1P22-201ENST00000456856 327 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 RPL30P6-201ENST00000475925 342 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.23□□□□□ -1.73
MEIS3Q99687 AC020893.1-201ENST00000502452 580 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 AC023632.1-201ENST00000518463 375 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.23□□□□□ -1.73
MEIS3Q99687 UBE2NP1-201ENST00000545592 458 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.23□□□□□ -1.73
MEIS3Q99687 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.23□□□□□ -1.73
MEIS3Q99687 AL512347.1-201ENST00000566420 503 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 ATP5F1P7-201ENST00000567330 760 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 ISCA1P3-201ENST00000577104 373 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.23□□□□□ -1.73
MEIS3Q99687 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.23□□□□□ -1.73
MEIS3Q99687 AP001542.2-201ENST00000593141 364 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.23□□□□□ -1.73
MEIS3Q99687 AC125494.3-201ENST00000602759 455 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AL135786.2-201ENST00000608422 615 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC243654.2-201ENST00000612843 443 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC015540.1-201ENST00000615828 501 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AL590240.3-201ENST00000621416 943 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 AC244100.1-202ENST00000621554 382 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.23□□□□□ -1.73
MEIS3Q99687 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
MEIS3Q99687 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MEIS3Q99687 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MEIS3Q99687 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
MEIS3Q99687 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
MEIS3Q99687 MTND5P24-201ENST00000438892 1767 ntBASIC4.22□□□□□ -1.73
MEIS3Q99687 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
MEIS3Q99687 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MEIS3Q99687 AP002088.1-201ENST00000382740 395 ntBASIC4.22□□□□□ -1.73
MEIS3Q99687 MT-TP-201ENST00000387461 68 ntBASIC4.22□□□□□ -1.73
MEIS3Q99687 RNU6-575P-201ENST00000411326 105 ntBASIC4.22□□□□□ -1.73
MEIS3Q99687 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.22□□□□□ -1.73
MEIS3Q99687 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.22□□□□□ -1.73
MEIS3Q99687 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.22□□□□□ -1.73
MEIS3Q99687 GTF2IP23-201ENST00000423746 351 ntBASIC4.22□□□□□ -1.73
MEIS3Q99687 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.22□□□□□ -1.73
MEIS3Q99687 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.22□□□□□ -1.73
MEIS3Q99687 AL050321.1-201ENST00000432363 400 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms