Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-837P-201ENST00000391056 108 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 ARF4P3-201ENST00000397387 509 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 SFR1P1-201ENST00000403720 688 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 MTATP6P31-201ENST00000406985 692 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AL353692.2-201ENST00000407054 335 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC096533.1-201ENST00000411645 353 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AL606490.7-201ENST00000433136 191 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC091862.1-201ENST00000438016 1100 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 RPS29P6-201ENST00000438196 145 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 ST13P20-201ENST00000447996 1065 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC091153.1-201ENST00000466297 402 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC023424.2-201ENST00000493479 777 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC008716.1-201ENST00000511084 513 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 SNORD116-30-201ENST00000516468 85 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 RNA5SP402-201ENST00000517148 110 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 IGKV2D-36-201ENST00000518643 226 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 HMGB1P41-201ENST00000520234 440 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC087481.2-201ENST00000565492 330 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 OR4G1P-201ENST00000588632 938 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC093227.2-201ENST00000589357 285 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AL606834.2-201ENST00000602954 668 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 MIR6076-201ENST00000617521 113 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 AC012442.3-202ENST00000636742 206 ntBASIC2.08□□□□□ -2.08
AP1S3Q96PC3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 MTCO1P12-201ENST00000414273 1543 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AL139276.1-201ENST00000311910 1001 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 RNU6-1243P-201ENST00000364028 107 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 SNORA71.1-201ENST00000364523 117 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 RPL7P8-201ENST00000411964 730 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 MORF4L1P7-201ENST00000426038 703 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 CR769767.1-201ENST00000436337 346 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AL513043.1-201ENST00000439124 535 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 PRDX3P3-201ENST00000447765 522 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC135721.1-201ENST00000497954 479 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 PRELID3BP5-201ENST00000508612 460 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 SCARNA13-201ENST00000516672 275 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC090136.1-201ENST00000520009 240 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC106785.1-201ENST00000565935 262 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 MYL12BP1-201ENST00000569826 507 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 MIR5680-201ENST00000577577 84 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 MIR4697-201ENST00000582977 78 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC008739.2-201ENST00000597006 317 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC008687.2-201ENST00000597865 520 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC007566.2-201ENST00000603642 413 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AL645944.1-201ENST00000603857 493 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 BNIP3P11-201ENST00000603878 563 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC095031.1-201ENST00000623685 672 ntBASIC2.07□□□□□ -2.08
AP1S3Q96PC3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
AP1S3Q96PC3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.06□□□□□ -2.08
AP1S3Q96PC3 RNU6-263P-201ENST00000363811 107 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
AP1S3Q96PC3 RNU6-851P-201ENST00000384565 107 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 MIR200C-201ENST00000384980 68 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 LINC01881-201ENST00000416103 412 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AL137014.1-201ENST00000420490 1226 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AL513175.2-201ENST00000422071 443 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AC092427.1-202ENST00000430569 476 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 RPS15AP7-201ENST00000439294 405 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AL513321.1-201ENST00000441175 761 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 Z75741.1-201ENST00000446793 314 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 VN1R34P-201ENST00000447387 883 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AL590664.1-201ENST00000448065 339 ntBASIC2.06□□□□□ -2.08
AP1S3Q96PC3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.06□□□□□ -2.08
AP1S3Q96PC3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms