Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 FRG1BP-201ENST00000278882 761 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 FRG1CP-201ENST00000358464 769 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 RNU4-79P-201ENST00000362764 141 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 U8.3-201ENST00000363321 132 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 U3.15-201ENST00000365398 212 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 MIR506-201ENST00000384998 124 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL049693.1-201ENST00000402760 611 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL590004.1-201ENST00000405321 300 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 RNU6-195P-201ENST00000411352 109 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 JKAMPP1-201ENST00000413804 919 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 PIGFP2-201ENST00000421400 651 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC092017.2-201ENST00000427600 362 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 C4BPAP2-201ENST00000428434 478 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 NPM1P34-201ENST00000428821 893 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 OR2B7P-201ENST00000429302 934 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 FTH1P6-201ENST00000430768 320 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 CALM1P1-201ENST00000442082 433 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 RPS27AP15-201ENST00000447672 466 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 TRGVB-201ENST00000453257 471 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 MEMO1P3-201ENST00000459811 302 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC090686.1-201ENST00000481577 749 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 RPL35P6-201ENST00000490024 372 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 POU5F1P7-201ENST00000508759 541 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 RN7SKP276-201ENST00000516242 268 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 IGKV1-32-201ENST00000519290 311 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC093519.1-201ENST00000566109 298 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 MIR3682-201ENST00000581338 84 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AP001180.3-201ENST00000582221 145 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 MIR544B-201ENST00000582372 78 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL391646.1-201ENST00000603860 190 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC104687.2-201ENST00000604442 342 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AP000942.4-201ENST00000604811 241 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC010680.4-201ENST00000605334 543 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC097468.3-201ENST00000607956 456 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC091905.1-201ENST00000624400 311 ntBASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 AC010928.1-201ENST00000592477 1447 ntBASIC3.97□□□□□ -1.77
ZNF48Q96MX3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 XIAPP3-201ENST00000312918 795 ntBASIC3.97□□□□□ -1.77
ZNF48Q96MX3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.97□□□□□ -1.77
ZNF48Q96MX3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 RNA5SP332-201ENST00000391063 115 ntBASIC3.97□□□□□ -1.77
ZNF48Q96MX3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF48Q96MX3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms