Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 Y_RNA.36-201ENST00000362602 112 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 RPL38P4-201ENST00000502376 214 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 IGKV2D-23-201ENST00000518179 286 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 AC010546.1-201ENST00000569391 485 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 BX248123.2-201ENST00000606318 124 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 AC245517.5-201ENST00000611529 162 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.34□□□□□ -2.03
TTC28Q96AY4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TTC28Q96AY4 AL121594.1-201ENST00000475906 575 ntBASIC2.34□□□□□ -2.04
TTC28Q96AY4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.34□□□□□ -2.04
TTC28Q96AY4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.34□□□□□ -2.04
TTC28Q96AY4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.34□□□□□ -2.04
TTC28Q96AY4 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.04
TTC28Q96AY4 WISP1-OT1-201ENST00000602893 642 ntBASIC2.34□□□□□ -2.04
TTC28Q96AY4 AL583832.1-201ENST00000603227 784 ntBASIC2.34□□□□□ -2.04
TTC28Q96AY4 AL353743.4-201ENST00000422653 1547 ntBASIC2.34□□□□□ -2.04
TTC28Q96AY4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
TTC28Q96AY4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TTC28Q96AY4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TTC28Q96AY4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TTC28Q96AY4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC016687.1-201ENST00000482574 353 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 FABP5P12-201ENST00000515543 389 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC104027.1-201ENST00000521887 300 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 MIR4285-201ENST00000581001 85 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TTC28Q96AY4 SNORD56.3-201ENST00000363507 71 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 RNU6-356P-201ENST00000384140 107 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 SNORA46-201ENST00000384762 135 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 RNU6-316P-201ENST00000391027 107 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC004825.2-201ENST00000616634 455 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 AC097714.1-201ENST00000511272 1647 ntBASIC2.33□□□□□ -2.04
TTC28Q96AY4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TTC28Q96AY4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TTC28Q96AY4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TTC28Q96AY4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
TTC28Q96AY4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.32□□□□□ -2.04
TTC28Q96AY4 CCNHP1-201ENST00000513311 678 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 MYL12AP1-201ENST00000518490 515 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC233702.9-201ENST00000581528 203 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TTC28Q96AY4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.32□□□□□ -2.04
TTC28Q96AY4 RPS7P13-201ENST00000413955 498 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 AL158825.1-201ENST00000414735 521 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 RPS3AP9-201ENST00000417027 792 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 VDAC1P3-201ENST00000434069 851 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC010469.1-201ENST00000463864 576 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC008507.1-201ENST00000587506 734 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC006272.2-201ENST00000594725 163 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 AC138627.1-204ENST00000641894 765 ntBASIC2.32□□□□□ -2.04
TTC28Q96AY4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TTC28Q96AY4 MTND5P23-201ENST00000430812 1655 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TTC28Q96AY4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.31□□□□□ -2.04
TTC28Q96AY4 AC009237.2-201ENST00000421358 284 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 MTATP6P11-201ENST00000428071 670 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 HMGN1P33-201ENST00000432945 451 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
TTC28Q96AY4 ARL2BPP6-201ENST00000512757 439 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.31□□□□□ -2.04
TTC28Q96AY4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.31□□□□□ -2.04
TTC28Q96AY4 MIR3199-2-201ENST00000636243 86 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TTC28Q96AY4 RNU6-342P-201ENST00000384521 104 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 ERHP2-201ENST00000402323 299 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 FAT1P1-201ENST00000406588 507 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 RPS4XP11-201ENST00000446897 772 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 RN7SKP43-201ENST00000516173 320 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.31□□□□□ -2.04
TTC28Q96AY4 AL591516.1-201ENST00000611326 274 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 AC009237.17-201ENST00000618111 748 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 AL359740.1-201ENST00000624340 592 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.31□□□□□ -2.04
TTC28Q96AY4 AC138915.3-201ENST00000562908 1389 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 AP005901.5-201ENST00000545779 1796 ntBASIC2.31□□□□□ -2.04
TTC28Q96AY4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
TTC28Q96AY4 RPL9P7-201ENST00000330965 580 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 HMGB1P16-201ENST00000447155 540 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.3□□□□□ -2.04
TTC28Q96AY4 AL355836.1-201ENST00000555951 870 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.3□□□□□ -2.04
TTC28Q96AY4 AC025048.6-202ENST00000627667 438 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
TTC28Q96AY4 AC233981.2-201ENST00000611524 1614 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 API5P2-201ENST00000397055 1498 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 RPL32P35-201ENST00000415214 394 ntBASIC2.3□□□□□ -2.04
TTC28Q96AY4 AC073587.1-201ENST00000447093 876 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms