Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.4□□□□□ -1.54
BRF1Q92994 AC021146.4-201ENST00000309229 279 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 RNU5E-1-201ENST00000362477 120 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 RNU6-451P-201ENST00000362921 107 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 MTATP6P18-201ENST00000417994 673 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 SDCBPP3-201ENST00000419629 891 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 EIF1P3-201ENST00000423841 334 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AL035410.1-201ENST00000427409 427 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.4□□□□□ -1.54
BRF1Q92994 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF1Q92994 GTF2IP20-201ENST00000431663 360 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF1Q92994 SEPT14P3-201ENST00000439401 183 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 AL732372.2-207ENST00000445840 183 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 SEPT14P2-201ENST00000453405 183 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.4□□□□□ -1.54
BRF1Q92994 AP1S2P1-201ENST00000457344 379 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 RPL12P20-201ENST00000475538 479 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 DEFB109F-201ENST00000491870 277 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF1Q92994 AC139783.2-201ENST00000504847 1145 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 TXNP6-201ENST00000510190 310 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 SEPT14P4-201ENST00000513445 186 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.4□□□□□ -1.54
BRF1Q92994 AC093677.1-201ENST00000514414 678 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF1Q92994 FO082796.1-201ENST00000523795 183 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 AC123904.2-201ENST00000548059 300 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF1Q92994 MIR3118-1-201ENST00000581787 76 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 MIR4480-201ENST00000582492 71 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF1Q92994 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF1Q92994 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF1Q92994 AC009161.2-201ENST00000624626 138 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 AC024614.3-201ENST00000637860 256 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
BRF1Q92994 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
BRF1Q92994 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
BRF1Q92994 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
BRF1Q92994 CKAP2P1-201ENST00000555477 2049 ntBASIC5.4□□□□□ -1.55
BRF1Q92994 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
BRF1Q92994 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
BRF1Q92994 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF1Q92994 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF1Q92994 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF1Q92994 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF1Q92994 MTND5P28-201ENST00000438005 1594 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC097714.1-201ENST00000511272 1647 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 OR52B1P-201ENST00000316506 909 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AL161781.1-201ENST00000354277 403 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF1Q92994 RNU4-73P-201ENST00000363164 141 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 Y_RNA.142-201ENST00000363491 102 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 RNU4-1-201ENST00000363925 141 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 RNU6-853P-201ENST00000364306 107 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 RNA5SP151-201ENST00000365632 117 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 Z98745.1-201ENST00000402553 494 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AL359704.1-201ENST00000411586 781 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC234779.1-201ENST00000425910 285 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC008850.1-201ENST00000427546 362 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 FTLP19-201ENST00000433300 394 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF1Q92994 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF1Q92994 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF1Q92994 RPS20P32-201ENST00000456044 356 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 RPS20P20-201ENST00000460498 340 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 APOOP2-201ENST00000461561 539 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AC087879.1-201ENST00000474343 374 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 FGF7P4-201ENST00000509595 295 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 RNU6-835P-201ENST00000516974 104 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.39□□□□□ -1.55
BRF1Q92994 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC007424.1-203ENST00000554613 687 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC078795.3-201ENST00000602913 472 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AC123786.2-201ENST00000603459 275 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AC121334.2-201ENST00000605387 271 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 YWHAEP7-203ENST00000622054 312 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AC140113.4-201ENST00000622087 222 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF1Q92994 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF1Q92994 AC006026.1-201ENST00000444025 1803 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms