Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC079448.1-201ENST00000449377 373 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.07□□□□□ -1.6
ERCC4Q92889 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.07□□□□□ -1.6
ERCC4Q92889 BX322784.1-201ENST00000455793 1077 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 TRBV26-201ENST00000456572 344 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 RPL38P1-201ENST00000460914 211 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AC092989.1-201ENST00000481235 277 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 HMGB1P36-201ENST00000487709 576 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.07□□□□□ -1.6
ERCC4Q92889 AC100770.1-201ENST00000532310 322 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 LSM6P2-201ENST00000552208 177 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AC063949.1-201ENST00000552900 865 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AC068446.3-201ENST00000555285 382 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.07□□□□□ -1.6
ERCC4Q92889 MIR3667-201ENST00000581025 74 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 MIR4480-201ENST00000582492 71 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 NRBF2P1-201ENST00000587407 859 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.07□□□□□ -1.6
ERCC4Q92889 AC005191.1-201ENST00000603950 358 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.07□□□□□ -1.6
ERCC4Q92889 AC091953.3-201ENST00000623220 236 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.07□□□□□ -1.6
ERCC4Q92889 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC4Q92889 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC4Q92889 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC4Q92889 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ERCC4Q92889 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.06□□□□□ -1.6
ERCC4Q92889 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 PNPT1P2-201ENST00000456768 2050 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 RN7SKP115-201ENST00000363177 317 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 RNU6-114P-201ENST00000384704 105 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC016769.3-201ENST00000396562 315 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 RPS3AP36-201ENST00000398190 775 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 RPS20P2-201ENST00000402520 389 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 RPL7P25-201ENST00000404151 721 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 FCF1P10-201ENST00000407590 479 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 RN7SKP267-201ENST00000410381 285 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 MTCO1P17-201ENST00000411522 491 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 PIGFP2-201ENST00000421400 651 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 AL358934.1-201ENST00000432346 324 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 AL451074.3-201ENST00000437709 472 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC002381.1-201ENST00000447049 280 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 NFU1P2-201ENST00000448700 469 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC006967.1-201ENST00000467608 589 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC092324.1-201ENST00000468671 324 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 RPL23AP2-201ENST00000471227 466 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC005726.1-201ENST00000494679 427 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 AC093824.1-201ENST00000508796 343 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC117522.1-201ENST00000509821 380 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC009646.1-201ENST00000510455 318 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 AK6P1-201ENST00000540219 478 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 ADI1P3-201ENST00000549509 470 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.06□□□□□ -1.6
ERCC4Q92889 AL157394.1-201ENST00000562983 1224 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 HMGB1P33-201ENST00000563485 527 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC4Q92889 HMGB2P1-201ENST00000591146 634 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.06□□□□□ -1.6
ERCC4Q92889 DUXAP4-201ENST00000603046 613 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC015813.4-201ENST00000610469 179 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC100827.5-201ENST00000615883 426 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC002553.4-201ENST00000616896 331 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 AC005609.4-201ENST00000625071 447 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC4Q92889 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ERCC4Q92889 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC4Q92889 Z73965.1-201ENST00000623412 2297 ntBASIC5.06□□□□□ -1.6
ERCC4Q92889 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC4Q92889 RNA5SP87-201ENST00000384155 118 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 BX295541.1-201ENST00000417774 250 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.05□□□□□ -1.6
ERCC4Q92889 USP9YP36-201ENST00000424581 829 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AL589872.1-201ENST00000426602 288 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC073464.1-201ENST00000429823 534 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms