Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SNRPGP18-201ENST00000553000 214 ntBASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 AMD1P2-201ENST00000412936 992 ntBASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 AP001086.1-201ENST00000494882 321 ntBASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 AC084373.1-201ENST00000603311 235 ntBASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 AC092435.4-201ENST00000623012 4159 ntBASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.07□□□□□ -2.24
SYNE2Q8WXH0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 DEFB109C-201ENST00000382575 264 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 DEFB109B-201ENST00000382656 264 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 U3.40-201ENST00000408706 208 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC006539.3-201ENST00000454258 129 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL391156.1-201ENST00000554965 554 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AP005901.5-201ENST00000545779 1796 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 ICE2P2-201ENST00000483823 2787 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 MIR1468-201ENST00000410600 86 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC244033.1-201ENST00000426826 870 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL445669.2-201ENST00000454425 421 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC008277.2-201ENST00000605196 797 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AP001521.1-201ENST00000609150 300 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 OR1S1-201ENST00000624470 978 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL732372.2-225ENST00000642124 456 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 NDUFB4P6-201ENST00000436819 366 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC098657.3-201ENST00000620434 263 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC005086.4-201ENST00000623065 213 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC010615.1-201ENST00000594254 1764 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 Z99497.1-201ENST00000421282 135 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC012360.2-201ENST00000609349 391 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP439-201ENST00000617595 124 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL158823.1-201ENST00000418441 478 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC012065.2-201ENST00000421295 375 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 RPL23AP58-201ENST00000440453 469 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 RPL29P29-201ENST00000448725 423 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC010928.3-201ENST00000587712 541 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC007621.1-201ENST00000604544 437 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 NUP58P1-201ENST00000502546 1738 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC104623.2-202ENST00000623477 4002 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP257-201ENST00000363023 116 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC079809.1-201ENST00000415468 276 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 NPM1P29-201ENST00000483112 803 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 Y_RNA.700-201ENST00000516806 100 ntBASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE2Q8WXH0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 MTND5P35-201ENST00000557537 1720 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AL356057.3-201ENST00000402607 340 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 RANP4-201ENST00000413361 655 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms