Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC022655.2-201ENST00000577280 318 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC103987.3-201ENST00000582071 292 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC010201.1-201ENST00000605051 540 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC040168.1-201ENST00000623594 991 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AL356121.2-201ENST00000624715 780 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC091925.2-201ENST00000625059 256 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 CR381572.1-201ENST00000625098 102 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC074029.4-201ENST00000624796 1859 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AL161781.1-201ENST00000354277 403 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNU1-44P-201ENST00000384453 163 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNY3P10-201ENST00000384764 102 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNU6ATAC-201ENST00000408749 126 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNU4-6P-201ENST00000410804 122 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC109583.1-201ENST00000432156 268 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC007389.2-201ENST00000434630 306 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 GDI2P2-201ENST00000445131 608 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNU6-956P-201ENST00000458868 103 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNA5SP246-201ENST00000458909 119 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC021146.3-201ENST00000511911 260 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 Y_RNA.655-201ENST00000515919 96 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AP000873.5-201ENST00000533906 236 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC006064.5-201ENST00000541782 248 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC006362.1-201ENST00000567392 174 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC120057.2-201ENST00000571520 271 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 RNA5SP108-201ENST00000605921 117 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC009237.17-201ENST00000618111 748 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 MIR6500-201ENST00000622700 86 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC093591.3-201ENST00000634516 308 ntBASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGB4Q8WW32 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
HMGB4Q8WW32 Z82217.1-201ENST00000625157 8149 ntBASIC4.21□□□□□ -1.73
HMGB4Q8WW32 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HMGB4Q8WW32 RNU6-623P-201ENST00000363143 105 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 Y_RNA.194-201ENST00000363985 102 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 SNORD51-201ENST00000384320 80 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 SNORD116-4-201ENST00000384733 96 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 RNU6-821P-201ENST00000390995 107 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 PGBD4P8-201ENST00000412993 562 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 RPS7P13-201ENST00000413955 498 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC006366.1-201ENST00000422002 759 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 MTCO3P5-201ENST00000433620 714 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC096638.2-201ENST00000434965 711 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 ST13P20-201ENST00000447996 1065 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 RPL7P52-201ENST00000449200 742 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 BTF3P5-201ENST00000457252 467 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 snoU13.3-201ENST00000459441 104 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AP001025.2-201ENST00000490908 477 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC110792.1-201ENST00000491826 472 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 DEFB109F-201ENST00000491870 277 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms