Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIR3158-1-201ENST00000583596 81 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC091946.2-201ENST00000606105 291 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC106052.1-201ENST00000608029 497 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 MFSD8-245ENST00000641743 948 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 U3.29-201ENST00000391296 212 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 RHEBP3-201ENST00000411920 351 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 MTND4P3-201ENST00000417829 541 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 GOT2P5-201ENST00000433995 546 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 HSPD1P21-201ENST00000436541 245 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 MTND2P19-201ENST00000449129 1012 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 SNORA84-201ENST00000459229 133 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC092757.1-201ENST00000467293 467 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 RN7SL594P-201ENST00000470590 287 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 RPS3AP50-201ENST00000487064 803 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC006390.1-201ENST00000508068 283 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 RN7SKP13-201ENST00000515933 244 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 RNU6-27P-201ENST00000516146 107 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 SNORA67.7-201ENST00000516664 135 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 Y_RNA.717-201ENST00000517106 92 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 IGKV2-23-201ENST00000518729 323 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AP006245.1-201ENST00000522549 120 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 LRRC6P1-201ENST00000532188 885 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AL389895.1-201ENST00000554127 252 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 MTATP6P24-201ENST00000576835 677 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AP001029.3-201ENST00000588063 596 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AL365400.2-201ENST00000605604 902 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AL391261.4-201ENST00000616012 481 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AC006133.1-201ENST00000617106 264 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.64□□□□□ -1.83
RTL3Q8N8U3 MTCO1P23-201ENST00000415223 1526 ntBASIC3.64□□□□□ -1.83
RTL3Q8N8U3 AL049780.3-201ENST00000624612 1583 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AL592310.1-201ENST00000414330 671 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC099677.1-201ENST00000420575 175 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC012065.2-201ENST00000421295 375 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC091286.1-201ENST00000431233 461 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC093155.1-201ENST00000440164 826 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 VN1R10P-201ENST00000447106 875 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC098826.2-201ENST00000452011 651 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 snoU109.4-201ENST00000458953 143 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC134050.1-201ENST00000495088 933 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 SETP14-201ENST00000497538 873 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms