Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 YWHAZP7-201ENST00000436906 631 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 MTCO3P11-201ENST00000455103 774 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 TRBV26-201ENST00000456572 344 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 SCARNA16.3-201ENST00000516595 184 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS8Q8N3P4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS8Q8N3P4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS8Q8N3P4 AL356274.1-201ENST00000617064 410 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
VPS8Q8N3P4 RAP1BP1-201ENST00000412709 553 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS8Q8N3P4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS8Q8N3P4 AL138787.1-202ENST00000437804 898 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 RNA5SP200-201ENST00000516360 103 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 AC021733.2-201ENST00000518830 497 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 AL356575.1-201ENST00000603008 283 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 AL627309.6-201ENST00000606857 840 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.49□□□□□ -1.85
VPS8Q8N3P4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS8Q8N3P4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS8Q8N3P4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS8Q8N3P4 AC008571.1-201ENST00000467232 300 ntBASIC3.48□□□□□ -1.85
VPS8Q8N3P4 RPL9P6-201ENST00000492764 598 ntBASIC3.48□□□□□ -1.85
VPS8Q8N3P4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS8Q8N3P4 U8.2-201ENST00000363156 134 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 DHFRP5-201ENST00000406944 564 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 FAM103A2P-201ENST00000444122 354 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 RPL23AP23-201ENST00000452590 471 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 RPS20P32-201ENST00000456044 356 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 snoU13.15-201ENST00000459407 104 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 RN7SKP34-201ENST00000516142 244 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AP001317.1-201ENST00000531194 960 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AC068313.1-201ENST00000604028 1008 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AL135786.2-201ENST00000608422 615 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AL451074.6-201ENST00000608512 729 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 AC013562.2-201ENST00000611632 603 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.47□□□□□ -1.85
VPS8Q8N3P4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
VPS8Q8N3P4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 AC116447.1-201ENST00000613153 453 ntBASIC3.46□□□□□ -1.86
VPS8Q8N3P4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
VPS8Q8N3P4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
VPS8Q8N3P4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 UBE2D3P1-201ENST00000436669 444 ntBASIC3.45□□□□□ -1.86
VPS8Q8N3P4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 MTND5P21-201ENST00000531961 522 ntBASIC3.45□□□□□ -1.86
VPS8Q8N3P4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 CR589904.2-201ENST00000612533 440 ntBASIC3.45□□□□□ -1.86
VPS8Q8N3P4 NF1P10-201ENST00000613227 742 ntBASIC3.45□□□□□ -1.86
VPS8Q8N3P4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS8Q8N3P4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 HMGB3P10-201ENST00000434734 572 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 RPL7P31-201ENST00000450192 724 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 CLIC4P1-201ENST00000453177 535 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AL354710.1-201ENST00000453641 246 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 ABI1P1-201ENST00000603375 1120 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 NR1H5P-201ENST00000452683 1377 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AC091152.2-201ENST00000591628 2569 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 MTND5P7-201ENST00000413558 1798 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 U3.37-201ENST00000408528 213 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS8Q8N3P4 MAGOH2P-202ENST00000584384 429 ntBASIC3.44□□□□□ -1.86
VPS8Q8N3P4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS8Q8N3P4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
VPS8Q8N3P4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS8Q8N3P4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AC004925.1-201ENST00000624256 2706 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 SNORA64-201ENST00000384674 134 ntBASIC3.43□□□□□ -1.86
VPS8Q8N3P4 AL023284.1-201ENST00000403956 276 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms