Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 MTND5P3-201ENST00000438536 1800 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf40Q8IXQ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 SNORA63.1-201ENST00000362493 131 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-374P-201ENST00000364146 108 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-906P-201ENST00000384700 70 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RNU2-28P-201ENST00000410457 189 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL161449.1-201ENST00000414531 1199 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL356320.2-201ENST00000417263 507 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL513175.2-201ENST00000422071 443 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL049610.1-201ENST00000423374 372 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL451062.2-201ENST00000427515 271 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL158071.1-201ENST00000430315 461 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 MTCO1P48-201ENST00000448024 1096 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 PRSS3P4-201ENST00000453323 162 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RPL21P10-201ENST00000463521 490 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RPS4XP10-201ENST00000465034 731 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 RN7SL330P-201ENST00000469709 307 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL136126.1-201ENST00000473603 402 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 OR4R3P-201ENST00000525084 838 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AP001636.2-201ENST00000525517 696 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 OR6C73P-201ENST00000546432 358 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC005476.1-201ENST00000554427 397 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 MTND3P19-201ENST00000603825 345 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC016877.3-201ENST00000606778 504 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC005332.6-201ENST00000613178 446 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC023158.2-201ENST00000614876 543 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AL713922.2-201ENST00000619384 716 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC099786.3-201ENST00000565735 1410 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 AC130650.2-201ENST00000618736 2403 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf40Q8IXQ3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 ZNF734P-201ENST00000419494 1534 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RNU5D-1-201ENST00000363299 116 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-657P-201ENST00000383904 107 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 PTP4A1P5-201ENST00000420305 455 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC005019.1-201ENST00000436455 431 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 USP9YP7-201ENST00000436723 430 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC007327.1-201ENST00000447461 264 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 USP9YP32-201ENST00000452432 430 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RFC5P1-201ENST00000454419 874 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RPS4XP2-201ENST00000458402 793 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RPL23AP62-201ENST00000463396 453 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC011979.1-201ENST00000472300 483 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 KLRA1P-201ENST00000503499 986 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 WBP1LP4-201ENST00000505043 344 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC112198.1-201ENST00000505369 1220 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 MTCO1P30-201ENST00000515244 580 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-1225P-201ENST00000516336 65 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 MTND2P32-201ENST00000521584 1038 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AADACP1-206ENST00000561502 1193 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC023813.2-201ENST00000564321 469 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms