Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 ELOCP4-201ENST00000420090 333 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 RGS17P1-201ENST00000423358 553 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL133173.1-201ENST00000423458 397 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 FAR2P4-202ENST00000425399 584 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 RPS11P7-201ENST00000442125 465 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 HMGN1P2-201ENST00000445197 310 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 NPM1P49-201ENST00000448027 714 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 SIAH1P1-201ENST00000479411 923 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 NDUFB5P1-201ENST00000508134 564 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 PARP4P3-201ENST00000510265 317 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC021146.1-201ENST00000511202 716 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC007016.1-201ENST00000512110 244 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC015795.1-201ENST00000513669 327 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 RN7SKP244-201ENST00000516513 307 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC087883.1-201ENST00000551882 391 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 ZNF519P2-201ENST00000557032 169 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL845331.3-202ENST00000562856 261 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC136619.2-201ENST00000563361 631 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC244505.7-201ENST00000599675 272 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC107304.1-201ENST00000604229 296 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 SUGT1P3-202ENST00000604259 383 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 MEMO1P5-201ENST00000604810 406 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL034351.1-201ENST00000605288 668 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC092794.1-201ENST00000612734 582 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC015967.1-201ENST00000619893 476 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 CASC19-264ENST00000641912 1184 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28AQ8IWP9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 SRRM1P3-201ENST00000426911 2678 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC106871.1-201ENST00000568324 3102 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR1S2-201ENST00000302592 978 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RNA5SP46-201ENST00000362370 120 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 U3.2-201ENST00000362981 210 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 SNORA73.1-201ENST00000363107 205 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RNA5SP122-201ENST00000384457 108 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AL109755.1-201ENST00000401791 649 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC012075.1-201ENST00000436549 580 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC093392.2-201ENST00000450682 337 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RPL36AP13-201ENST00000457490 317 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC093899.1-201ENST00000457984 376 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 RN7SL51P-201ENST00000468230 285 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC010285.1-201ENST00000470580 392 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC100832.1-201ENST00000471945 383 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC006427.1-201ENST00000514359 712 ntBASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC28AQ8IWP9 OR5G4P-201ENST00000525251 760 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms