Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC096921.1-201ENST00000411661 375 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 GSTM3P2-201ENST00000412746 530 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 PGBD4P6-201ENST00000421501 610 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC105402.2-201ENST00000438503 358 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 DYNLT3P2-201ENST00000442517 295 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 SNORD125-201ENST00000459538 96 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 RPL21P8-201ENST00000465083 535 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC006967.1-201ENST00000467608 589 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 RN7SL583P-201ENST00000475692 287 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC022493.2-201ENST00000506122 481 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP228-201ENST00000516232 133 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC022616.4-201ENST00000522985 181 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 RRN3P3-201ENST00000549207 578 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC110743.1-201ENST00000584870 478 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC020910.3-201ENST00000603701 874 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AL021879.1-201ENST00000611756 288 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 EIF3FP1-201ENST00000613970 806 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 MIR6810-201ENST00000622701 70 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AL353662.3-201ENST00000625131 237 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC091812.1-201ENST00000432235 1948 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AC130650.2-201ENST00000618736 2403 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AL159987.1-201ENST00000347911 293 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.210-201ENST00000364161 110 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-128P-201ENST00000383976 107 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 SNORA24.1-201ENST00000384401 135 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AL133173.1-201ENST00000423458 397 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC113412.1-201ENST00000425840 504 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 USMG5P1-201ENST00000425964 177 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC092013.1-201ENST00000438795 332 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-1132P-201ENST00000459214 107 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC116533.1-201ENST00000459748 321 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 RPL21P93-201ENST00000480465 489 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC074255.1-201ENST00000511259 501 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC023157.2-201ENST00000540596 141 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AL049779.2-201ENST00000553847 315 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 HSBP1P1-201ENST00000555205 166 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 MIR4436B2-201ENST00000581415 91 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 MIR3941-201ENST00000582572 103 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 MIR4436B1-201ENST00000583272 91 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 AC011626.1-201ENST00000604710 562 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 MTND5P7-201ENST00000413558 1798 ntBASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SH3RF1Q7Z6J0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RPL23P2-201ENST00000320371 421 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP183-201ENST00000362452 119 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.39-201ENST00000362620 98 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP319-201ENST00000362768 119 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP326-201ENST00000363209 110 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP131-201ENST00000365452 119 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-61P-201ENST00000365528 109 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.461-201ENST00000384263 103 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 MIR765-201ENST00000390226 114 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RNU2-23P-201ENST00000410545 195 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RN7SKP213-201ENST00000410746 298 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 HSFY6P-201ENST00000445573 403 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms