Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 ISCA1P1-201ENST00000426679 387 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 MED14P1-201ENST00000430517 648 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC087650.1-201ENST00000431445 468 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC000111.3-201ENST00000433478 193 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 MTCO3P18-201ENST00000440206 761 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 MTCO2P25-201ENST00000447065 681 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 RPL7P31-201ENST00000450192 724 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 MTND1P11-201ENST00000456661 876 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AP000926.1-201ENST00000479573 241 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC091951.2-201ENST00000500762 203 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC108941.1-201ENST00000502853 530 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC007016.1-201ENST00000512110 244 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC109445.1-201ENST00000512356 383 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 FTH1P9-201ENST00000513251 355 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC010342.1-201ENST00000514047 877 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 RNU6-1004P-201ENST00000516584 111 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 SNORA20.3-201ENST00000516880 132 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AP003392.2-201ENST00000527269 208 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC005832.3-201ENST00000537929 631 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC012435.1-202ENST00000568772 240 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 MIR3160-1-201ENST00000577972 85 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.84□□□□□ -1.79
USP43Q70EL4 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC005498.1-201ENST00000592125 465 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC009220.3-201ENST00000604318 586 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AL121655.1-201ENST00000605811 308 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC092354.1-201ENST00000606057 376 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AP005019.3-201ENST00000620418 560 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 AC068724.3-201ENST00000625906 87 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 AC100871.1-201ENST00000507871 1456 ntBASIC3.84□□□□□ -1.8
USP43Q70EL4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
USP43Q70EL4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP43Q70EL4 MFSD8-242ENST00000641690 4199 ntBASIC3.84□□□□□ -1.8
USP43Q70EL4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP43Q70EL4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP43Q70EL4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
USP43Q70EL4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP43Q70EL4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP43Q70EL4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP43Q70EL4 TAF9BP1-201ENST00000396646 746 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 MIR1193-201ENST00000408109 78 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 RNU2-65P-201ENST00000410162 185 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 RN7SKP222-201ENST00000410651 315 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.83□□□□□ -1.8
USP43Q70EL4 C1DP2-201ENST00000418167 426 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 CYCSP46-201ENST00000423569 204 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 OR8F1P-201ENST00000425243 930 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 RPS12P10-201ENST00000427031 377 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.83□□□□□ -1.8
USP43Q70EL4 HMGB1P45-201ENST00000435986 653 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AC093155.1-201ENST00000440164 826 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 AL353093.1-201ENST00000441292 436 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 USP9YP8-201ENST00000441913 500 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.83□□□□□ -1.8
USP43Q70EL4 NUTF2P7-201ENST00000453086 375 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 RFC5P1-201ENST00000454419 874 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.83□□□□□ -1.8
USP43Q70EL4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AC023424.2-201ENST00000493479 777 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AC046134.1-201ENST00000514454 666 ntBASIC3.83□□□□□ -1.8
USP43Q70EL4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.83□□□□□ -1.8
USP43Q70EL4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.83□□□□□ -1.8
USP43Q70EL4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.83□□□□□ -1.8
USP43Q70EL4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.83□□□□□ -1.8
USP43Q70EL4 AC123904.3-201ENST00000547218 814 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms