Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 Y_RNA.72-201ENST00000362894 103 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 Y_RNA.813-201ENST00000364639 102 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 RN7SKP235-201ENST00000410662 305 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC119751.6-201ENST00000416712 186 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 UQCRBP1-201ENST00000421129 336 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 EIF1P3-201ENST00000423841 334 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 RPS26P47-201ENST00000427219 348 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 COX6CP13-201ENST00000428703 226 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 BTF3P6-201ENST00000448054 499 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 FDX1P2-201ENST00000450769 375 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL691482.1-201ENST00000453255 87 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 PMCHL2-203ENST00000457791 237 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 RPS20P21-201ENST00000466859 343 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC006967.1-201ENST00000467608 589 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC021382.1-201ENST00000483523 359 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 RN7SKP276-201ENST00000516242 268 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 MIR3146-201ENST00000580367 79 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC068790.3-201ENST00000602988 553 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC008782.1-201ENST00000603386 430 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL158211.4-201ENST00000606988 584 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AC015871.5-202ENST00000623252 701 ntBASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RUFY4Q6ZNE9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 RNU6-169P-201ENST00000365336 107 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 SNORD82-201ENST00000365530 70 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AL357515.1-201ENST00000402967 542 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 RN7SKP16-201ENST00000410180 299 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 TBCAP2-201ENST00000416175 326 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AL592293.2-201ENST00000422292 996 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 GPR143P-201ENST00000434155 205 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC093156.1-201ENST00000440382 670 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 RPL7AP61-201ENST00000443410 636 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC079781.2-201ENST00000446424 169 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 SLC25A18P1-201ENST00000449385 454 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 UBDP1-202ENST00000457888 382 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 RPL12P20-201ENST00000475538 479 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 RN7SL441P-201ENST00000492388 296 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 OR5H5P-201ENST00000503164 928 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 RN7SKP46-201ENST00000515942 234 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 OR4R3P-201ENST00000525084 838 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 PDCD5P1-201ENST00000543528 309 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 GLYCAM1-201ENST00000546596 285 ntBASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.44□□□□□ -1.54
RUFY4Q6ZNE9 AC055876.1-202ENST00000567053 138 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms