Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 RPS3P1-201ENST00000456781 192 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 AC114781.4-201ENST00000513707 639 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 RPL23AP88-201ENST00000605759 454 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 AC026790.2-201ENST00000606282 430 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 AC104446.1-201ENST00000613728 1321 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 ZNF90P1-201ENST00000480493 1951 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 RNU6-1331P-201ENST00000363658 106 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AL139095.1-201ENST00000404326 391 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 BTBD10P2-201ENST00000404779 676 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AC009965.2-201ENST00000425328 970 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AC126389.1-201ENST00000477436 290 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 RPS27P27-201ENST00000498779 255 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 RNA5SP320-201ENST00000516263 124 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AC034236.3-201ENST00000605999 461 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AL049780.3-201ENST00000624612 1583 ntBASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
CCDC171Q6TFL3 AC004925.1-201ENST00000624256 2706 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AL672167.1-206ENST00000356293 943 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 RNU4-82P-201ENST00000362443 140 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 TRGV6-201ENST00000417928 299 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC048351.1-201ENST00000420064 602 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC073310.1-201ENST00000423226 1033 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 RPS12P2-201ENST00000439728 269 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 SSXP4-201ENST00000451349 245 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC023050.1-201ENST00000498198 304 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC108471.1-201ENST00000513977 287 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 RNU4-29P-201ENST00000515943 174 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 SERPINE4P-201ENST00000554978 281 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AP005205.1-201ENST00000563503 508 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC234778.2-201ENST00000566241 354 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 LLPHP1-201ENST00000603571 367 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC113368.1-201ENST00000603736 382 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 AC121761.2-201ENST00000617300 689 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.03□□□□□ -1.92
CCDC171Q6TFL3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 U3.12-201ENST00000364498 214 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 MIR518C-201ENST00000384822 101 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 VN1R51P-201ENST00000411675 945 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 RFESDP1-201ENST00000422350 461 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 HMGN2P13-201ENST00000476476 274 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AC010486.1-201ENST00000511793 424 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AL391156.1-201ENST00000554965 554 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AL359693.1-201ENST00000614959 2407 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.02□□□□□ -1.93
CCDC171Q6TFL3 AL157700.1-201ENST00000561973 1432 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AC087565.3-202ENST00000642085 1603 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 MIR27B-201ENST00000385129 97 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 HMGN2P35-201ENST00000412164 270 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AF279873.1-201ENST00000523393 313 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 MIR4435-1-201ENST00000582552 80 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 MIR6817-201ENST00000615588 66 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 AC010809.3-201ENST00000621310 641 ntBASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC171Q6TFL3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms