Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 RNU6-712P-201ENST00000410558 100 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 RPL17P36-201ENST00000420302 549 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 GLRXP1-201ENST00000423261 334 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 PSMA6P3-201ENST00000428242 164 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC004854.1-201ENST00000440356 349 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 EEF1A1P39-201ENST00000440791 250 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 RRM2P4-201ENST00000441721 562 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 MTCYBP11-201ENST00000447254 1109 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 RPS24P6-201ENST00000452670 400 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 TMED11P-201ENST00000479478 690 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 HMGB3P15-201ENST00000507326 574 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AP006245.1-201ENST00000522549 120 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC005832.3-201ENST00000537929 631 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC012669.1-201ENST00000603209 283 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AL365503.1-201ENST00000605247 905 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 RNU4-5P-201ENST00000607255 135 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AL590282.1-201ENST00000610379 1136 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AL121772.2-201ENST00000614331 297 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC006963.1-201ENST00000624003 1052 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 ZNF285B-201ENST00000561698 1767 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC244517.1-201ENST00000606030 2086 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 OTUD4P1-201ENST00000237841 3067 ntBASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HIST2H2AA3Q6FI13 AC066616.2-201ENST00000559334 1481 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 ZNF29P-201ENST00000225587 168 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 RNU6-413P-201ENST00000384115 107 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 RNU2-15P-201ENST00000410692 191 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC068533.2-201ENST00000411872 306 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 MTATP6P20-201ENST00000414147 562 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 RPS7P15-201ENST00000415804 584 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AL009048.1-201ENST00000450437 298 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 SLC31A1P1-201ENST00000451221 567 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC073387.1-201ENST00000453261 709 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AL445669.2-201ENST00000454425 421 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 PTGES3P5-201ENST00000455109 434 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 HMGN2P7-201ENST00000456186 273 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC005410.1-202ENST00000460347 485 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 FCF1P3-201ENST00000496394 590 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC020893.1-201ENST00000502452 580 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 HMGB1P28-201ENST00000507778 552 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 RNU1-45P-201ENST00000517191 141 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC104986.1-201ENST00000517978 436 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 EEF1B2P4-201ENST00000551398 348 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AADACP1-206ENST00000561502 1193 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 MIR4425-201ENST00000580572 84 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 BNIP3P24-201ENST00000593398 557 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC144521.1-201ENST00000607148 956 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HIST2H2AA3Q6FI13 AC004925.1-201ENST00000624256 2706 ntBASIC3.35□□□□□ -1.87
HIST2H2AA3Q6FI13 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.35□□□□□ -1.87
HIST2H2AA3Q6FI13 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HIST2H2AA3Q6FI13 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST2H2AA3Q6FI13 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms