Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD4Q5XG99 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD4Q5XG99 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.65□□□□□ -1.82
LYSMD4Q5XG99 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
LYSMD4Q5XG99 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
LYSMD4Q5XG99 ZNF37BP-203ENST00000452306 1352 ntBASIC3.65□□□□□ -1.82
LYSMD4Q5XG99 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.65□□□□□ -1.82
LYSMD4Q5XG99 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
LYSMD4Q5XG99 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 FAM133CP-201ENST00000332869 704 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 SNRPEP3-201ENST00000338402 276 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RNU1-33P-201ENST00000364249 162 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RNA5SP424-201ENST00000390988 115 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 SOD2P1-201ENST00000396543 562 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RSL24D1P4-201ENST00000400938 484 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RNU6-757P-201ENST00000410334 100 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC096664.2-201ENST00000411843 406 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 PTP4A1P5-201ENST00000420305 455 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RPL7P53-201ENST00000421245 739 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC244098.2-201ENST00000422068 99 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 HLA-N-201ENST00000437516 135 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC092427.1-201ENST00000439177 601 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 MTND2P20-201ENST00000440805 661 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 EXTL2P1-201ENST00000446218 416 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AL133477.1-201ENST00000457472 514 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 MTND1P16-201ENST00000465177 898 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RN7SL807P-201ENST00000470923 297 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC004263.1-201ENST00000479327 332 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RPL7P24-201ENST00000493052 752 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 PPBPP1-201ENST00000510807 373 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 FTH1P9-201ENST00000513251 355 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 RN7SKP116-201ENST00000516902 319 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 MYL12AP1-201ENST00000518490 515 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AP001636.2-201ENST00000525517 696 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AL354943.1-201ENST00000572103 781 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC010928.3-201ENST00000587712 541 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC009220.3-201ENST00000604318 586 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC069304.2-201ENST00000605154 435 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AC092650.2-201ENST00000619984 902 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD4Q5XG99 LINC02471-203ENST00000641941 4752 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 Y_RNA.311-201ENST00000365068 96 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 RNU6-1122P-201ENST00000384449 107 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 ARF4P3-201ENST00000397387 509 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AL139421.1-201ENST00000423010 169 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 MTND1P32-201ENST00000433043 938 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC006480.1-201ENST00000449887 378 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 SYPL1P1-201ENST00000473622 768 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 NCOR1P1-202ENST00000486162 291 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AP000563.1-201ENST00000490865 758 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC108078.3-201ENST00000502633 489 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 OR5H5P-201ENST00000503164 928 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC093767.1-201ENST00000504523 156 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC093534.1-201ENST00000504977 132 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC104090.1-201ENST00000506341 1171 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC106782.4-201ENST00000568264 210 ntBASIC3.64□□□□□ -1.83
LYSMD4Q5XG99 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms