Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 TLK1P1-201ENST00000456760 2440 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RNU6-359P-201ENST00000365466 108 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RNU6-510P-201ENST00000391239 108 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RNU6-1068P-201ENST00000410958 103 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 AC009965.2-201ENST00000425328 970 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 HMGN2P27-201ENST00000427352 270 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 ATP5JP1-201ENST00000431631 322 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 BTF3P6-201ENST00000448054 499 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 AC073073.1-201ENST00000493920 463 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RPL38P4-201ENST00000502376 214 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 TMEM248P1-201ENST00000510579 951 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RNU6-347P-201ENST00000516658 105 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 OR5B19P-201ENST00000531766 928 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 OR4T1P-201ENST00000554933 911 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 AC008782.1-201ENST00000603386 430 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 RAD17P1-201ENST00000418130 2042 ntBASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.04□□□□□ -1.44
USPL1Q5W0Q7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 MIR92A2-201ENST00000385299 75 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 RNU6-332P-201ENST00000391193 108 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC068050.1-201ENST00000394891 380 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC140479.3-201ENST00000418944 1126 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 BNIP3P2-201ENST00000441221 577 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 DDX3P2-201ENST00000446138 111 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL162591.2-201ENST00000449634 317 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AL356010.1-201ENST00000456364 102 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC006511.1-201ENST00000470614 315 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC087879.1-201ENST00000474343 374 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 RNA5SP401-201ENST00000515920 127 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 RNU1-6P-201ENST00000516290 144 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 RNU6-410P-201ENST00000517006 107 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC090572.1-201ENST00000519251 160 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 RPL23AP53-201ENST00000521854 457 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC107934.1-201ENST00000522215 217 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC243960.4-201ENST00000600532 288 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 AC019278.1-201ENST00000623516 479 ntBASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
USPL1Q5W0Q7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 RNA5SP388-201ENST00000362584 119 ntBASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 Y_RNA.326-201ENST00000365176 113 ntBASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 RNU6-74P-201ENST00000384235 107 ntBASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 AC007738.1-201ENST00000413892 348 ntBASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 COX6CP15-201ENST00000426313 211 ntBASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 RPL36P19-201ENST00000430744 301 ntBASIC6.02□□□□□ -1.45
USPL1Q5W0Q7 RPS17P8-201ENST00000434525 335 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms