Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP188Q5SRE5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP188Q5SRE5 AL512646.1-201ENST00000269395 1077 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 AL356292.1-201ENST00000283110 373 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 RNU1-17P-201ENST00000363022 152 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 MIR137-201ENST00000385223 102 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 USP9YP20-201ENST00000419224 558 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 VN1R17P-201ENST00000472048 1090 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP188Q5SRE5 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP188Q5SRE5 OR7K1P-201ENST00000546439 926 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 CKS1BP1-201ENST00000555221 240 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 RNU6-84P-201ENST00000607737 102 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 AP001521.1-201ENST00000609150 300 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP188Q5SRE5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP188Q5SRE5 AL445437.1-201ENST00000623157 3087 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 AL450326.2-201ENST00000421913 1962 ntBASIC3.11□□□□□ -1.91
NUP188Q5SRE5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AL354710.1-201ENST00000453641 246 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC078814.3-201ENST00000553036 491 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AP004247.3-201ENST00000608682 624 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AP003499.2-201ENST00000624100 483 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC025125.1-201ENST00000624743 1922 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 GSTA12P-201ENST00000402398 508 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC013410.1-201ENST00000436223 1232 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC104090.1-201ENST00000506341 1171 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 RNU6-1053P-201ENST00000515930 101 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 SNORA70.14-201ENST00000516205 110 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 RN7SKP82-201ENST00000516786 223 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AC021269.2-201ENST00000532318 330 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 snoU13.31-201ENST00000607291 104 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 AL450489.1-201ENST00000612071 468 ntBASIC3.1□□□□□ -1.91
NUP188Q5SRE5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUP188Q5SRE5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
NUP188Q5SRE5 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NUP188Q5SRE5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NUP188Q5SRE5 SPA17P1-201ENST00000416656 452 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 AL606490.7-201ENST00000433136 191 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.09□□□□□ -1.91
NUP188Q5SRE5 AP001086.1-201ENST00000494882 321 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 AC117522.2-201ENST00000510049 657 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 AC021733.2-201ENST00000518830 497 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 GNAI2P1-201ENST00000541815 315 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.09□□□□□ -1.91
NUP188Q5SRE5 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
NUP188Q5SRE5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
NUP188Q5SRE5 MTND5P28-201ENST00000438005 1594 ntBASIC3.09□□□□□ -1.92
NUP188Q5SRE5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 EXOC5P1-201ENST00000510543 1969 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 SNORD6-201ENST00000365444 73 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 RN7SKP32-201ENST00000410167 303 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AC108667.1-201ENST00000428618 249 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 ACTR6P1-201ENST00000514311 1104 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AC017076.1-201ENST00000607613 578 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 AC011460.1-201ENST00000636268 1834 ntBASIC3.08□□□□□ -1.92
NUP188Q5SRE5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.08□□□□□ -1.92
NUP188Q5SRE5 Y_RNA.355-201ENST00000365462 98 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 EIF5P1-201ENST00000400019 1231 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 FAT1P1-201ENST00000406588 507 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 AC012498.1-201ENST00000424037 437 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 RPL23AP49-201ENST00000492925 468 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 AL390023.1-201ENST00000428836 262 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 AC009969.1-201ENST00000438726 172 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 snoU13.18-201ENST00000459483 104 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms