Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 RPS7P2-201ENST00000435134 607 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC004865.1-201ENST00000442276 1003 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 NPM1P13-201ENST00000452663 865 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 snoU13.3-201ENST00000459441 104 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AP001992.1-205ENST00000462248 379 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 RPS27P23-201ENST00000487608 251 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AL024509.2-201ENST00000493462 493 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 CAB39P1-201ENST00000502277 460 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 COL6A4P2-205ENST00000509855 506 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC087272.1-201ENST00000523624 533 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 OR5G4P-201ENST00000525251 760 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 OSBPL9P3-201ENST00000534523 595 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC095057.3-201ENST00000567102 1157 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC021851.1-201ENST00000608537 1082 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 AC118273.1-201ENST00000525324 3006 ntBASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN20Q4JDL3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 RNU6-374P-201ENST00000364146 108 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AL121972.1-201ENST00000402023 252 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 RNA5SP129-201ENST00000410276 118 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 KRR1P1-201ENST00000419430 803 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AL121882.1-201ENST00000422893 417 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 DUTP6-201ENST00000425573 462 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC017099.1-201ENST00000448261 1028 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 snoU13.24-201ENST00000458998 104 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 snoU13.22-201ENST00000459428 104 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC078857.1-201ENST00000469870 667 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC010285.1-201ENST00000470580 392 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC087879.1-201ENST00000474343 374 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 RPS29P2-201ENST00000479278 136 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 SETP6-201ENST00000479329 568 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC027338.1-201ENST00000514840 825 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 MTCO2P32-201ENST00000514865 403 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 RNA5SP341-201ENST00000516261 117 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 VN1R88P-201ENST00000596787 292 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC015871.2-201ENST00000603605 948 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC091488.1-201ENST00000604239 660 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AC245100.7-201ENST00000609678 442 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AL390240.1-201ENST00000612950 384 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 MIR8084-201ENST00000614105 89 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 MTCO1P6-201ENST00000481192 1384 ntBASIC3.11□□□□□ -1.91
PTPN20Q4JDL3 AL136164.4-201ENST00000625013 2135 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 RNU6-609P-201ENST00000365459 107 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 RNU6-481P-201ENST00000384194 107 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 MTATP6P11-201ENST00000428071 670 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AC006946.1-201ENST00000429106 328 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 HMGN2P20-201ENST00000437531 273 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 RAB11AP1-201ENST00000442978 646 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AL162389.1-201ENST00000449233 177 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 PTGES3P5-201ENST00000455109 434 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 RPL7P23-201ENST00000493874 747 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 CR383656.14-201ENST00000551951 406 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AC079148.1-201ENST00000565944 819 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 MTCO3P24-201ENST00000572729 782 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 BNIP3P4-201ENST00000604946 565 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 AC006963.1-201ENST00000624003 1052 ntBASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
PTPN20Q4JDL3 MTCO1P4-201ENST00000520516 1409 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms