Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTCH1Q13635 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 UBE2V1P11-201ENST00000411559 285 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 ARL2BPP3-201ENST00000421226 480 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCH1Q13635 B3GNT2P1-201ENST00000434960 952 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.91□□□□□ -1.78
PTCH1Q13635 MTND2P6-201ENST00000455337 1030 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 SNX5P1-201ENST00000505757 1041 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.91□□□□□ -1.78
PTCH1Q13635 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 AC245166.1-201ENST00000521012 253 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCH1Q13635 IGKV3-31-201ENST00000523109 329 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 AP001646.1-201ENST00000527936 915 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCH1Q13635 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.91□□□□□ -1.78
PTCH1Q13635 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCH1Q13635 AC121761.2-201ENST00000617300 689 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 FAM157B-203ENST00000639350 358 ntBASIC3.91□□□□□ -1.78
PTCH1Q13635 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTCH1Q13635 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTCH1Q13635 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PTCH1Q13635 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PTCH1Q13635 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PTCH1Q13635 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PTCH1Q13635 RNA5SP274-201ENST00000410484 108 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.9□□□□□ -1.78
PTCH1Q13635 RPS15AP40-201ENST00000419621 391 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 AL513343.1-201ENST00000451818 792 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 RPS27P29-201ENST00000463110 252 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.9□□□□□ -1.78
PTCH1Q13635 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PTCH1Q13635 AC007424.1-203ENST00000554613 687 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.9□□□□□ -1.78
PTCH1Q13635 AC027104.1-201ENST00000563702 681 ntBASIC3.9□□□□□ -1.78
PTCH1Q13635 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.9□□□□□ -1.78
PTCH1Q13635 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCH1Q13635 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCH1Q13635 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCH1Q13635 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCH1Q13635 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCH1Q13635 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCH1Q13635 RNA5SP68-201ENST00000363885 119 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 RNA5SP167-201ENST00000365461 116 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AC023128.2-201ENST00000420880 1223 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AC005189.1-201ENST00000431286 310 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCH1Q13635 AL691517.1-201ENST00000440833 1235 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AC146507.1-201ENST00000468335 354 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCH1Q13635 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCH1Q13635 RNA5SP282-201ENST00000516355 108 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCH1Q13635 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.89□□□□□ -1.79
PTCH1Q13635 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCH1Q13635 AL442163.2-201ENST00000553912 710 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AC024595.1-201ENST00000623088 387 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AC006065.5-201ENST00000623427 349 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCH1Q13635 TAB3P1-202ENST00000452645 1634 ntBASIC3.89□□□□□ -1.79
PTCH1Q13635 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PTCH1Q13635 FAM133CP-201ENST00000332869 704 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 RNU6-252P-201ENST00000363232 107 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.88□□□□□ -1.79
PTCH1Q13635 RPS20P25-201ENST00000412447 352 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.88□□□□□ -1.79
PTCH1Q13635 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCH1Q13635 UQCRHP3-201ENST00000451503 251 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCH1Q13635 RN7SL633P-201ENST00000488974 297 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 RN7SKP277-201ENST00000516895 283 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.88□□□□□ -1.79
PTCH1Q13635 AC026616.1-201ENST00000523157 525 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 OR8L1P-201ENST00000534005 955 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCH1Q13635 OR6C73P-201ENST00000546432 358 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCH1Q13635 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCH1Q13635 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCH1Q13635 VN1R79P-201ENST00000593540 513 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 STMN1P1-201ENST00000617809 440 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 AL118508.4-201ENST00000624142 1176 ntBASIC3.88□□□□□ -1.79
PTCH1Q13635 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTCH1Q13635 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTCH1Q13635 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTCH1Q13635 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCH1Q13635 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCH1Q13635 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCH1Q13635 MIR3074-201ENST00000384885 81 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AC245054.2-201ENST00000415639 319 ntBASIC3.87□□□□□ -1.79
PTCH1Q13635 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCH1Q13635 PSMA2P3-201ENST00000429685 675 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms