Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
FOXF2Q12947 OR14L1P-202ENST00000641545 3009 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 GNG5P1-201ENST00000255500 204 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC021146.4-201ENST00000309229 279 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 Y_RNA.67-201ENST00000362870 100 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 Y_RNA.166-201ENST00000363730 102 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 RNU6-1322P-201ENST00000364309 107 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 SNORA71.2-201ENST00000364941 134 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
FOXF2Q12947 MIR1305-201ENST00000408300 86 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 ELOCP19-201ENST00000411919 318 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AL353193.1-201ENST00000421444 268 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AL589872.1-201ENST00000426602 288 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC133104.1-201ENST00000429100 218 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AL365400.1-201ENST00000431854 640 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXF2Q12947 ACTR3P2-201ENST00000439585 1257 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC022431.1-201ENST00000450941 438 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXF2Q12947 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AL121877.1-201ENST00000453704 622 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 MTND1P12-201ENST00000455231 147 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC233279.1-201ENST00000455300 423 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 RN7SL385P-201ENST00000468873 276 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 RPL36AP51-201ENST00000487216 318 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC026427.2-201ENST00000506228 536 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC006390.1-201ENST00000508068 283 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AC007016.1-201ENST00000512110 244 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 Y_RNA.672-201ENST00000516289 104 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AC105029.1-201ENST00000520250 669 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AP003181.2-201ENST00000528941 181 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AC011611.1-201ENST00000552179 197 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.12□□□□□ -1.75
FOXF2Q12947 SULT1C2P2-201ENST00000562517 294 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC084783.1-201ENST00000565846 910 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 CYCSP40-201ENST00000575927 294 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC243960.4-201ENST00000600532 288 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC007687.1-201ENST00000602704 304 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AC243654.2-201ENST00000612843 443 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 AC015914.2-201ENST00000618167 288 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC068722.2-201ENST00000618734 544 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC079684.1-201ENST00000621405 437 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 OR2L1P-202ENST00000641567 1023 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.12□□□□□ -1.75
FOXF2Q12947 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
FOXF2Q12947 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
FOXF2Q12947 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXF2Q12947 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXF2Q12947 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXF2Q12947 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXF2Q12947 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXF2Q12947 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
FOXF2Q12947 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXF2Q12947 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 AC108467.2-201ENST00000617640 1597 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
FOXF2Q12947 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXF2Q12947 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
FOXF2Q12947 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXF2Q12947 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
FOXF2Q12947 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
FOXF2Q12947 RNU6-451P-201ENST00000362921 107 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 RPS20P2-201ENST00000402520 389 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXF2Q12947 OR9R1P-201ENST00000412200 877 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXF2Q12947 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXF2Q12947 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXF2Q12947 RPL7P57-201ENST00000423238 740 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 EIF1P3-201ENST00000423841 334 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXF2Q12947 RPEP2-201ENST00000432149 701 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 RPL22P17-201ENST00000438729 315 ntBASIC4.11□□□□□ -1.75
FOXF2Q12947 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms