Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 MIR513B-201ENST00000385136 84 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 SNORD17-201ENST00000390930 237 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AL355379.1-201ENST00000405542 640 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.54□□□□□ -1.84
CNTN1Q12860 AC009237.5-201ENST00000414271 501 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTN1Q12860 RPL21P109-201ENST00000422213 475 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTN1Q12860 SKP1P1-201ENST00000438081 489 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN1Q12860 CR769776.1-201ENST00000441254 787 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.54□□□□□ -1.84
CNTN1Q12860 AL136097.1-201ENST00000456945 913 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 USP9YP25-201ENST00000457708 443 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 RPL21P10-201ENST00000463521 490 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AL358832.1-201ENST00000497800 389 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CNTN1Q12860 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN1Q12860 AC026784.1-201ENST00000507986 352 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN1Q12860 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN1Q12860 RNU6-579P-201ENST00000516879 102 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 RNU4-60P-201ENST00000517239 135 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN1Q12860 IGKV2D-36-201ENST00000518643 226 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTN1Q12860 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTN1Q12860 AC090695.1-201ENST00000561269 1222 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 AC025588.3-201ENST00000604182 274 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 RNA5SP108-201ENST00000605921 117 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTN1Q12860 AC008083.4-201ENST00000615076 444 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.54□□□□□ -1.84
CNTN1Q12860 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.54□□□□□ -1.84
CNTN1Q12860 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 CR381670.1-201ENST00000624291 1693 ntBASIC3.54□□□□□ -1.84
CNTN1Q12860 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTN1Q12860 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CNTN1Q12860 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNTN1Q12860 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CNTN1Q12860 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CNTN1Q12860 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 Y_RNA.192-201ENST00000363977 102 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 RNU6-374P-201ENST00000364146 108 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.53□□□□□ -1.84
CNTN1Q12860 MIR506-201ENST00000384998 124 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 RNU6-328P-201ENST00000390887 106 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 RN7SKP53-201ENST00000411337 315 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 ELOCP9-201ENST00000418624 239 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 USP9YP7-201ENST00000436723 430 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.53□□□□□ -1.84
CNTN1Q12860 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 MTCO2P25-201ENST00000447065 681 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 USP9YP32-201ENST00000452432 430 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.53□□□□□ -1.84
CNTN1Q12860 OR4G11P-201ENST00000492842 939 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 SETP14-201ENST00000497538 873 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 RN7SKP265-201ENST00000516448 223 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 RNA5SP309-201ENST00000516670 106 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.53□□□□□ -1.84
CNTN1Q12860 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.53□□□□□ -1.84
CNTN1Q12860 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.53□□□□□ -1.84
CNTN1Q12860 MTND4P33-201ENST00000556706 766 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 NCAPGP2-201ENST00000557911 754 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.53□□□□□ -1.84
CNTN1Q12860 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN1Q12860 AC083899.3-201ENST00000603413 594 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AL513477.2-201ENST00000607858 568 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC103710.3-201ENST00000608157 948 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AL355816.2-201ENST00000610049 647 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC231759.1-201ENST00000616455 597 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 OR6C71P-202ENST00000641886 1107 ntBASIC3.53□□□□□ -1.84
CNTN1Q12860 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN1Q12860 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN1Q12860 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CNTN1Q12860 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
CNTN1Q12860 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.52□□□□□ -1.85
CNTN1Q12860 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTN1Q12860 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.52□□□□□ -1.85
CNTN1Q12860 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms