Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.49□□□□□ -1.85
SCN1BQ07699 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SCN1BQ07699 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SCN1BQ07699 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN1BQ07699 RNU1-132P-201ENST00000364300 164 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 SNORA72.3-201ENST00000365074 132 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 MIR513B-201ENST00000385136 84 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AL391417.1-201ENST00000404100 426 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 RNU4-25P-201ENST00000410569 230 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RN7SKP182-201ENST00000410772 298 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 CCDC58P2-201ENST00000417131 366 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RPL36AP36-201ENST00000418616 301 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 COX6B1P7-201ENST00000430845 235 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 RPL17P49-201ENST00000443728 411 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RPS29P31-201ENST00000446147 164 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AL606517.1-201ENST00000446914 387 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AC098824.1-201ENST00000453565 980 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN1BQ07699 RPS29P33-201ENST00000456717 146 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RNA5SP310-201ENST00000459084 116 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.49□□□□□ -1.85
SCN1BQ07699 RN7SL459P-201ENST00000481078 302 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 HMGB1P36-201ENST00000487709 576 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 VN1R104P-201ENST00000505115 1009 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AC093281.2-201ENST00000510153 597 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AC008958.1-201ENST00000511047 682 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 RNU6-311P-201ENST00000516224 102 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RNU6-528P-201ENST00000516926 100 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RNU6-714P-201ENST00000516963 103 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 MTND2P32-201ENST00000521584 1038 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 C1GALT1P3-201ENST00000522049 819 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 FAM60DP-201ENST00000524174 632 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AGGF1P5-201ENST00000567900 919 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN1BQ07699 MIR4277-201ENST00000578298 84 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 IPO5P1-202ENST00000600039 287 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AL133507.1-201ENST00000605269 557 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 RMST_8.1-201ENST00000610287 165 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AC008121.2-201ENST00000614647 523 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.49□□□□□ -1.85
SCN1BQ07699 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.49□□□□□ -1.85
SCN1BQ07699 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 OR6C71P-202ENST00000641886 1107 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 AC073429.2-201ENST00000569694 1444 ntBASIC3.49□□□□□ -1.85
SCN1BQ07699 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN1BQ07699 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN1BQ07699 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN1BQ07699 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN1BQ07699 AC011477.1-204ENST00000623416 1325 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SCN1BQ07699 RNU6-289P-201ENST00000364093 107 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 RPS4XP9-201ENST00000405151 780 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RPL26P29-201ENST00000415623 438 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RPL23AP38-201ENST00000423801 469 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 BX119904.4-201ENST00000424402 301 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 HMGN2P20-201ENST00000437531 273 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN1BQ07699 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SCN1BQ07699 CR769776.1-201ENST00000441254 787 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN1BQ07699 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN1BQ07699 RPS11P1-201ENST00000451072 473 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN1BQ07699 AL136097.1-201ENST00000456945 913 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RN7SL303P-201ENST00000469773 251 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN1BQ07699 RPS29P22-201ENST00000472363 168 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RPL7P24-201ENST00000493052 752 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RPL29P14-201ENST00000495837 428 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AL139099.1-201ENST00000497398 403 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN1BQ07699 AC104090.1-201ENST00000506341 1171 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 TXNP6-201ENST00000510190 310 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN1BQ07699 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN1BQ07699 SNORA70.16-201ENST00000516390 95 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 RN7SKP60-201ENST00000516985 239 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN1BQ07699 ERHP1-201ENST00000523006 310 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms