Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LUZP4P1-201ENST00000415420 344 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 AC011753.1-201ENST00000451001 220 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 MTCO3P20-201ENST00000454926 688 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
HSPG2P98160 AC128657.1-201ENST00000549459 145 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 SNRPGP18-201ENST00000553000 214 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 YWHAEP7-203ENST00000622054 312 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 MFSD8-245ENST00000641743 948 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HSPG2P98160 SCN1A-220ENST00000641603 12506 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.46□□□□□ -2.18
HSPG2P98160 RN7SKP140-201ENST00000411196 284 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.46□□□□□ -2.18
HSPG2P98160 AC021269.2-201ENST00000532318 330 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.46□□□□□ -2.18
HSPG2P98160 MIR3199-1-201ENST00000582434 88 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 AC025946.2-201ENST00000603398 234 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 OR52B1P-201ENST00000316506 909 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 MIR337-201ENST00000362281 93 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.45□□□□□ -2.18
HSPG2P98160 AC005840.1-201ENST00000498412 377 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 RN7SKP96-201ENST00000516948 297 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.45□□□□□ -2.18
HSPG2P98160 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.45□□□□□ -2.18
HSPG2P98160 AC005046.1-201ENST00000608515 625 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.45□□□□□ -2.18
HSPG2P98160 AL353743.4-201ENST00000422653 1547 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HSPG2P98160 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 Y_RNA.374-201ENST00000365606 101 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.45□□□□□ -2.18
HSPG2P98160 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HSPG2P98160 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 FABP5P12-201ENST00000515543 389 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 IGLVIV-53-201ENST00000520107 367 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.45□□□□□ -2.18
HSPG2P98160 AL355836.1-201ENST00000555951 870 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.45□□□□□ -2.18
HSPG2P98160 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HSPG2P98160 SNORA51.11-201ENST00000384442 131 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 HSPD1P16-201ENST00000402302 394 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 RN7SKP285-201ENST00000410137 318 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC002524.1-201ENST00000411687 547 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AL159169.1-201ENST00000421119 127 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.45□□□□□ -2.18
HSPG2P98160 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.45□□□□□ -2.18
HSPG2P98160 AC116158.1-201ENST00000560231 2129 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.45□□□□□ -2.18
HSPG2P98160 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HSPG2P98160 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.45□□□□□ -2.18
HSPG2P98160 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC080013.2-201ENST00000460866 323 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.45□□□□□ -2.18
HSPG2P98160 AC091515.1-201ENST00000548110 679 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 AC103710.1-201ENST00000610003 901 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 RMST_2.1-201ENST00000617263 136 ntBASIC1.45□□□□□ -2.18
HSPG2P98160 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 AC004520.1-201ENST00000608362 1413 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 USP9YP6-201ENST00000413550 854 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 USP9YP34-201ENST00000453983 808 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 CEACAMP4-201ENST00000457676 421 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC087385.1-201ENST00000475062 312 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC026241.1-201ENST00000517873 2142 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC122134.1-201ENST00000565664 1104 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.44□□□□□ -2.18
HSPG2P98160 MIR4644-201ENST00000579929 84 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC093311.1-201ENST00000506586 2021 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 Z73965.1-201ENST00000623412 2297 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC008432.1-201ENST00000615912 1320 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.44□□□□□ -2.18
HSPG2P98160 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 AL162578.1-201ENST00000406202 378 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC126182.1-201ENST00000478134 357 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 DYNLL1P6-201ENST00000503440 264 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC002064.3-201ENST00000623448 346 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms