Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNA1P78396 VN1R88P-201ENST00000596787 292 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.56□□□□□ -1.84
CCNA1P78396 AL356118.1-201ENST00000635272 1078 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCNA1P78396 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
CCNA1P78396 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNA1P78396 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNA1P78396 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNA1P78396 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNA1P78396 MIR525-201ENST00000384978 85 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNA1P78396 ATP5F1P6-201ENST00000402768 767 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AL591034.1-201ENST00000407447 340 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 VN1R51P-201ENST00000411675 945 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AIMP1P1-201ENST00000418670 937 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNA1P78396 RPL17P49-201ENST00000443728 411 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 RPL21P8-201ENST00000465083 535 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNA1P78396 VN1R104P-201ENST00000505115 1009 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNA1P78396 AC004062.1-201ENST00000509926 645 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 RNU6-751P-201ENST00000516382 101 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AC103833.1-201ENST00000517442 172 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNA1P78396 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNA1P78396 AL389895.1-201ENST00000554127 252 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 ELOCP29-201ENST00000588193 334 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.55□□□□□ -1.84
CCNA1P78396 AC009948.4-201ENST00000604692 675 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AC135178.6-201ENST00000605314 398 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AL365400.2-201ENST00000605604 902 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 AC097372.4-201ENST00000625025 466 ntBASIC3.55□□□□□ -1.84
CCNA1P78396 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNA1P78396 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNA1P78396 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.55□□□□□ -1.84
CCNA1P78396 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNA1P78396 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNA1P78396 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CCNA1P78396 SNORA48.8-201ENST00000391324 134 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AL353692.2-201ENST00000407054 335 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNA1P78396 AC114973.1-201ENST00000429057 632 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC011242.1-201ENST00000433596 1158 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AC010881.1-201ENST00000433830 235 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 AL513321.1-201ENST00000441175 761 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNA1P78396 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNA1P78396 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNA1P78396 MRPS31P2-201ENST00000451581 518 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 DNAJC19P8-201ENST00000452887 259 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNA1P78396 HMGN2P13-201ENST00000476476 274 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC083906.5-201ENST00000503722 328 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC087276.1-201ENST00000529659 480 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNA1P78396 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC099778.2-201ENST00000610904 211 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 MIR1264-201ENST00000616374 69 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.54□□□□□ -1.84
CCNA1P78396 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNA1P78396 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNA1P78396 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCNA1P78396 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCNA1P78396 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CCNA1P78396 OR5J1P-201ENST00000313544 939 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 NACA3P-201ENST00000359690 648 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCNA1P78396 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 AL031121.1-201ENST00000406553 254 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 ARL2BPP3-201ENST00000421226 480 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 AC006548.1-201ENST00000427470 102 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.53□□□□□ -1.84
CCNA1P78396 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNA1P78396 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCNA1P78396 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 RNA5SP356-201ENST00000515972 94 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 HIGD1AP6-201ENST00000521833 279 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNA1P78396 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNA1P78396 OR4T1P-201ENST00000554933 911 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 CKS1BP1-201ENST00000555221 240 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 GTF3AP2-201ENST00000557014 266 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms