Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM4P67936 RNU6-819P-201ENST00000364116 107 ntBASIC3.09□□□□□ -1.91
TPM4P67936 Y_RNA.625-201ENST00000411256 107 ntBASIC3.09□□□□□ -1.91
TPM4P67936 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC092638.1-201ENST00000411966 1275 ntBASIC3.09□□□□□ -1.91
TPM4P67936 LINC01347-201ENST00000417964 355 ntBASIC3.09□□□□□ -1.91
TPM4P67936 RPL23AP74-201ENST00000437246 471 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM4P67936 ST13P20-201ENST00000447996 1065 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AL034418.1-201ENST00000448675 860 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC112492.1-201ENST00000449607 712 ntBASIC3.09□□□□□ -1.91
TPM4P67936 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM4P67936 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC020898.1-201ENST00000474167 787 ntBASIC3.09□□□□□ -1.91
TPM4P67936 RPS3AP43-201ENST00000479743 781 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
TPM4P67936 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TPM4P67936 HMGB1P23-201ENST00000518743 568 ntBASIC3.09□□□□□ -1.91
TPM4P67936 DUXAP2-201ENST00000519198 589 ntBASIC3.09□□□□□ -1.91
TPM4P67936 PSMA2P1-201ENST00000526365 646 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM4P67936 AL442163.2-201ENST00000553912 710 ntBASIC3.09□□□□□ -1.91
TPM4P67936 H3F3AP1-201ENST00000559984 334 ntBASIC3.09□□□□□ -1.91
TPM4P67936 COX6CP3-201ENST00000580869 223 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC092474.3-201ENST00000603022 568 ntBASIC3.09□□□□□ -1.91
TPM4P67936 ELOCP35-201ENST00000604289 336 ntBASIC3.09□□□□□ -1.91
TPM4P67936 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM4P67936 CYCSP41-201ENST00000616920 296 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC015967.1-201ENST00000619893 476 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC026422.1-201ENST00000623961 452 ntBASIC3.09□□□□□ -1.91
TPM4P67936 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM4P67936 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM4P67936 AC119674.1-220ENST00000641502 1048 ntBASIC3.09□□□□□ -1.91
TPM4P67936 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TPM4P67936 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.92
TPM4P67936 SNORA25.6-201ENST00000364121 118 ntBASIC3.08□□□□□ -1.92
TPM4P67936 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM4P67936 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM4P67936 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AL606490.8-201ENST00000441624 319 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AL591503.2-201ENST00000442314 1005 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM4P67936 AL359073.1-201ENST00000448036 403 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM4P67936 RPL23AP15-201ENST00000450202 459 ntBASIC3.08□□□□□ -1.92
TPM4P67936 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM4P67936 RPS4XP10-201ENST00000465034 731 ntBASIC3.08□□□□□ -1.92
TPM4P67936 RNF138P1-201ENST00000502765 546 ntBASIC3.08□□□□□ -1.92
TPM4P67936 WBP1LP4-201ENST00000505043 344 ntBASIC3.08□□□□□ -1.92
TPM4P67936 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM4P67936 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.08□□□□□ -1.92
TPM4P67936 SCARNA13-201ENST00000516672 275 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM4P67936 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM4P67936 AP003385.6-201ENST00000531603 374 ntBASIC3.08□□□□□ -1.92
TPM4P67936 MIR5004-201ENST00000579078 107 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AL669831.4-202ENST00000590817 238 ntBASIC3.08□□□□□ -1.92
TPM4P67936 DUXAP4-201ENST00000603046 613 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC009220.3-201ENST00000604318 586 ntBASIC3.08□□□□□ -1.92
TPM4P67936 SUMO2P14-201ENST00000604488 293 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC135178.6-201ENST00000605314 398 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC004696.1-201ENST00000614345 607 ntBASIC3.08□□□□□ -1.92
TPM4P67936 MIR7112-201ENST00000616126 65 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC107905.1-201ENST00000616204 426 ntBASIC3.08□□□□□ -1.92
TPM4P67936 AC006249.1-201ENST00000621223 471 ntBASIC3.08□□□□□ -1.92
TPM4P67936 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM4P67936 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM4P67936 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TPM4P67936 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 AC233263.6-201ENST00000631132 1963 ntBASIC3.07□□□□□ -1.92
TPM4P67936 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TPM4P67936 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.07□□□□□ -1.92
TPM4P67936 AP003122.5-201ENST00000527668 3766 ntBASIC3.07□□□□□ -1.92
TPM4P67936 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TPM4P67936 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TPM4P67936 AC016716.1-201ENST00000265882 708 ntBASIC3.07□□□□□ -1.92
TPM4P67936 OR52E6-202ENST00000379946 954 ntBASIC3.07□□□□□ -1.92
TPM4P67936 DEFA7P-201ENST00000382676 285 ntBASIC3.07□□□□□ -1.92
TPM4P67936 Y_RNA.493-201ENST00000384422 102 ntBASIC3.07□□□□□ -1.92
TPM4P67936 MT-TC-201ENST00000387405 66 ntBASIC3.07□□□□□ -1.92
TPM4P67936 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TPM4P67936 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TPM4P67936 AC025750.1-201ENST00000399891 379 ntBASIC3.07□□□□□ -1.92
TPM4P67936 MIR1289-1-201ENST00000408836 144 ntBASIC3.07□□□□□ -1.92
TPM4P67936 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 RPS20P25-201ENST00000412447 352 ntBASIC3.07□□□□□ -1.92
TPM4P67936 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
TPM4P67936 AC073310.1-201ENST00000423226 1033 ntBASIC3.07□□□□□ -1.92
TPM4P67936 HSFY1P1-201ENST00000423928 1178 ntBASIC3.07□□□□□ -1.92
TPM4P67936 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.07□□□□□ -1.92
TPM4P67936 SNORA31.15-201ENST00000516771 132 ntBASIC3.07□□□□□ -1.92
TPM4P67936 HMGB1P41-201ENST00000520234 440 ntBASIC3.07□□□□□ -1.92
TPM4P67936 OSBPL9P3-201ENST00000534523 595 ntBASIC3.07□□□□□ -1.92
TPM4P67936 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.07□□□□□ -1.92
TPM4P67936 DNAJC8P1-201ENST00000554535 372 ntBASIC3.07□□□□□ -1.92
TPM4P67936 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.07□□□□□ -1.92
TPM4P67936 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms