Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 RNU6-1035P-201ENST00000384477 107 ntBASIC1.69□□□□□ -2.14
RPS28P62857 MIR181A2-201ENST00000384863 110 ntBASIC1.69□□□□□ -2.14
RPS28P62857 RN7SKP229-201ENST00000410465 302 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.69□□□□□ -2.14
RPS28P62857 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 RAB11AP1-201ENST00000442978 646 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.69□□□□□ -2.14
RPS28P62857 RPL7P15-201ENST00000461190 712 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AC107626.1-201ENST00000471084 183 ntBASIC1.69□□□□□ -2.14
RPS28P62857 VPS26AP1-201ENST00000483197 979 ntBASIC1.69□□□□□ -2.14
RPS28P62857 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 EIF1P7-201ENST00000487533 337 ntBASIC1.69□□□□□ -2.14
RPS28P62857 CEACAMP10-202ENST00000495431 496 ntBASIC1.69□□□□□ -2.14
RPS28P62857 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.69□□□□□ -2.14
RPS28P62857 LSM3P4-201ENST00000502948 309 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AC008413.1-201ENST00000511864 177 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AC118465.1-201ENST00000513820 1271 ntBASIC1.69□□□□□ -2.14
RPS28P62857 RNU6-1095P-201ENST00000516148 108 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC1.69□□□□□ -2.14
RPS28P62857 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RPS28P62857 RGS5-219ENST00000528019 512 ntTSL 4 BASIC1.69□□□□□ -2.14
RPS28P62857 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.69□□□□□ -2.14
RPS28P62857 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 AC126177.5-201ENST00000549599 178 ntBASIC1.69□□□□□ -2.14
RPS28P62857 EEF1B2P4-201ENST00000551398 348 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AL049779.2-201ENST00000553847 315 ntBASIC1.69□□□□□ -2.14
RPS28P62857 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 RPL21P12-201ENST00000559810 515 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC1.69□□□□□ -2.14
RPS28P62857 MIR4287-201ENST00000579398 78 ntBASIC1.69□□□□□ -2.14
RPS28P62857 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
RPS28P62857 AC007229.1-201ENST00000590455 412 ntBASIC1.69□□□□□ -2.14
RPS28P62857 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC1.69□□□□□ -2.14
RPS28P62857 AC040174.2-201ENST00000602701 465 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AC010738.1-201ENST00000604970 987 ntBASIC1.69□□□□□ -2.14
RPS28P62857 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.69□□□□□ -2.14
RPS28P62857 VN1R74P-201ENST00000613259 503 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AL162373.1-201ENST00000620433 407 ntBASIC1.69□□□□□ -2.14
RPS28P62857 AL356321.1-201ENST00000621360 228 ntBASIC1.69□□□□□ -2.14
RPS28P62857 ZNF663P-202ENST00000641770 1131 ntBASIC1.69□□□□□ -2.14
RPS28P62857 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 MTND4P27-201ENST00000450813 1354 ntBASIC1.69□□□□□ -2.14
RPS28P62857 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RPS28P62857 AC080128.1-201ENST00000474389 1917 ntBASIC1.68□□□□□ -2.14
RPS28P62857 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPS28P62857 CKAP2P1-201ENST00000555477 2049 ntBASIC1.68□□□□□ -2.14
RPS28P62857 RNU1-35P-201ENST00000362782 153 ntBASIC1.68□□□□□ -2.14
RPS28P62857 SNORD82-201ENST00000365530 70 ntBASIC1.68□□□□□ -2.14
RPS28P62857 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPS28P62857 RNA5SP270-201ENST00000411361 118 ntBASIC1.68□□□□□ -2.14
RPS28P62857 RPL26P29-201ENST00000415623 438 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AL139413.1-201ENST00000421309 217 ntBASIC1.68□□□□□ -2.14
RPS28P62857 SRIP2-201ENST00000428470 166 ntBASIC1.68□□□□□ -2.14
RPS28P62857 KRT18P53-201ENST00000431919 117 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC236972.1-201ENST00000433225 199 ntBASIC1.68□□□□□ -2.14
RPS28P62857 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RPS28P62857 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
RPS28P62857 KLF3P2-201ENST00000465138 268 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 RN7SL790P-201ENST00000474043 298 ntBASIC1.68□□□□□ -2.14
RPS28P62857 RPL35P6-201ENST00000490024 372 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC090453.1-201ENST00000495560 436 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 AC106872.4-201ENST00000510050 523 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 AC083923.1-201ENST00000523708 376 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 GNG2-208ENST00000554875 430 ntTSL 5 BASIC1.68□□□□□ -2.14
RPS28P62857 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.68□□□□□ -2.14
RPS28P62857 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 AC135628.1-201ENST00000568867 534 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC1.68□□□□□ -2.14
RPS28P62857 MIR4448-201ENST00000584360 86 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC091167.4-201ENST00000605079 184 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AP001486.3-201ENST00000615334 372 ntBASIC1.68□□□□□ -2.14
RPS28P62857 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.68□□□□□ -2.14
RPS28P62857 AC092608.3-201ENST00000625017 386 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.68□□□□□ -2.14
RPS28P62857 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.68□□□□□ -2.14
RPS28P62857 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.68□□□□□ -2.14
RPS28P62857 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RPS28P62857 MTND4P1-201ENST00000457501 1466 ntBASIC1.68□□□□□ -2.14
RPS28P62857 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPS28P62857 CR383658.2-201ENST00000547576 1525 ntBASIC1.67□□□□□ -2.14
RPS28P62857 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPS28P62857 HSPE1P11-201ENST00000339579 310 ntBASIC1.67□□□□□ -2.14
RPS28P62857 OR56A5-201ENST00000340110 738 ntBASIC1.67□□□□□ -2.14
RPS28P62857 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 RNU6-220P-201ENST00000390919 107 ntBASIC1.67□□□□□ -2.14
RPS28P62857 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms