Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CLRN1P58418 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 AC000374.1-201ENST00000434698 1745 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN1P58418 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLRN1P58418 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN1P58418 AC099654.2-201ENST00000433031 1980 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLRN1P58418 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLRN1P58418 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 RNU6-223P-201ENST00000362830 107 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 RNA5SP507-201ENST00000363603 121 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 RNU5A-8P-201ENST00000364102 114 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 MIR19A-201ENST00000384878 82 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 MT-TD-201ENST00000387419 68 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 AL078599.1-201ENST00000402075 293 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AL591416.1-201ENST00000404015 867 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 MTCO3P12-201ENST00000416718 547 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 CYCSP10-201ENST00000417973 294 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 OR2AH1P-201ENST00000425717 928 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 Z95327.1-201ENST00000446082 482 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AC079781.2-201ENST00000446424 169 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN1P58418 snoU13.20-201ENST00000459180 104 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AC090686.1-201ENST00000481577 749 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 RPL32P9-201ENST00000487963 407 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 AC008953.1-201ENST00000497334 318 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 RN7SKP82-201ENST00000516786 223 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 PDCD5P1-201ENST00000543528 309 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN1P58418 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN1P58418 AC015917.1-201ENST00000579654 510 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AC245517.5-201ENST00000611529 162 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 DISC2.1-201ENST00000612827 205 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AL512624.1-201ENST00000613638 469 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AP002799.1-201ENST00000623552 423 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AL596275.2-204ENST00000641628 552 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AL596275.2-206ENST00000641957 626 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AL672167.1-204ENST00000641875 3017 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN1P58418 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLRN1P58418 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLRN1P58418 AL359893.1-201ENST00000447628 1580 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLRN1P58418 AC005332.5-201ENST00000591222 2919 ntBASIC4.35□□□□□ -1.71
CLRN1P58418 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN1P58418 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN1P58418 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN1P58418 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLRN1P58418 AC011155.1-201ENST00000316512 456 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RNA5SP305-201ENST00000362665 119 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RNU6-74P-201ENST00000384235 107 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 SNORA70-201ENST00000384436 135 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AL357515.1-201ENST00000402967 542 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 MTND1P14-201ENST00000427400 950 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AC008065.1-201ENST00000428525 348 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN1P58418 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN1P58418 AL138799.3-201ENST00000438968 350 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN1P58418 CEACAMP7-201ENST00000444105 496 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN1P58418 AC140076.1-201ENST00000449897 361 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RNU7-63P-201ENST00000459054 62 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RPS27AP17-201ENST00000463344 455 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RPL37P6-202ENST00000464216 403 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN1P58418 BX284632.1-201ENST00000478218 541 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RPS3AP50-201ENST00000487064 803 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 RN7SL214P-201ENST00000487317 265 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 PCBP2P3-201ENST00000509726 843 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 FTH1P21-201ENST00000512179 511 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 OR5BC1P-201ENST00000529327 739 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN1P58418 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN1P58418 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN1P58418 HMGN2P6-201ENST00000551091 273 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.34□□□□□ -1.71
CLRN1P58418 COX6CP3-201ENST00000580869 223 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms