Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 HSPE1P1-201ENST00000421494 318 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AC018630.2-202ENST00000422992 927 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 RAC1P6-201ENST00000423911 575 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA1P56159 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 SAR1AP4-201ENST00000429225 591 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA1P56159 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA1P56159 AL589765.3-201ENST00000446084 462 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AL162389.1-201ENST00000449233 177 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 Z92846.1-201ENST00000456203 268 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 RNU7-180P-201ENST00000459240 63 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 SNRPCP2-201ENST00000504370 475 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 Y_RNA.691-201ENST00000516611 103 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 MTND4P7-201ENST00000523876 130 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.78□□□□□ -1.64
GFRA1P56159 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.78□□□□□ -1.64
GFRA1P56159 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.78□□□□□ -1.64
GFRA1P56159 OR1F2P-201ENST00000570470 933 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 MIR4458-201ENST00000578872 75 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 AL022099.1-201ENST00000604551 712 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AC021646.1-201ENST00000605469 484 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.78□□□□□ -1.64
GFRA1P56159 TUG1_2.1-201ENST00000614234 87 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 MIR6133-201ENST00000617057 108 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 AC068831.8-201ENST00000620171 435 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GFRA1P56159 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 AC006484.1-201ENST00000435086 1884 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA1P56159 AC073136.1-201ENST00000449426 2884 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AC093535.2-201ENST00000624769 2326 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 FRG1CP-201ENST00000358464 769 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 RNA5SP453-201ENST00000362503 119 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 RNU6-1287P-201ENST00000362914 107 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 SNORD115-7-201ENST00000365306 82 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 RNU6-356P-201ENST00000384140 107 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 RNU6-1060P-201ENST00000384664 107 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
GFRA1P56159 RNU6-837P-201ENST00000391056 108 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
GFRA1P56159 RNU6-387P-201ENST00000411331 105 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 VTI1BP4-201ENST00000427516 527 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA1P56159 AL121871.1-201ENST00000443413 436 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AL031584.1-201ENST00000447169 754 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 RPL23AP55-201ENST00000498163 452 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 NDUFB5P1-201ENST00000508134 564 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 TTC39CP1-201ENST00000512513 755 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 SCARNA15.1-201ENST00000516384 125 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.77□□□□□ -1.65
GFRA1P56159 AP001922.4-201ENST00000526967 290 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 AC024940.3-201ENST00000538551 316 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA1P56159 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 AC026464.5-201ENST00000562497 722 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA1P56159 MIR7853-201ENST00000584820 132 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 MIR4424-201ENST00000585257 86 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA1P56159 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 AL161729.3-201ENST00000603533 673 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AC108738.1-201ENST00000603703 237 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AL034351.1-201ENST00000605288 668 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 AC138965.3-201ENST00000623875 498 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms