Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC011242.1-201ENST00000433596 1158 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH6P55285 HSPE1P28-201ENST00000443139 211 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AC004022.1-201ENST00000447766 1066 ntBASIC3.22□□□□□ -1.89
CDH6P55285 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH6P55285 RPL7P55-201ENST00000450522 746 ntBASIC3.22□□□□□ -1.89
CDH6P55285 HMGB1P15-201ENST00000453854 435 ntBASIC3.22□□□□□ -1.89
CDH6P55285 NECAP1P2-201ENST00000455668 727 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH6P55285 AC093278.1-201ENST00000494700 600 ntBASIC3.22□□□□□ -1.89
CDH6P55285 RNA5SP468-201ENST00000516782 93 ntBASIC3.22□□□□□ -1.89
CDH6P55285 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.22□□□□□ -1.89
CDH6P55285 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH6P55285 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH6P55285 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH6P55285 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
CDH6P55285 CCDC58P3-201ENST00000590792 430 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL031985.2-201ENST00000600955 480 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AL354696.1-201ENST00000614652 497 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AC090116.1-201ENST00000615679 446 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AC099506.2-201ENST00000623074 221 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AP006248.3-201ENST00000623580 594 ntBASIC3.22□□□□□ -1.89
CDH6P55285 AC097372.4-201ENST00000625025 466 ntBASIC3.22□□□□□ -1.89
CDH6P55285 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH6P55285 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
CDH6P55285 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.21□□□□□ -1.89
CDH6P55285 AC117529.2-201ENST00000512159 2068 ntBASIC3.21□□□□□ -1.89
CDH6P55285 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDH6P55285 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH6P55285 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH6P55285 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CDH6P55285 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.9
CDH6P55285 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
CDH6P55285 SNORD15B-201ENST00000384714 146 ntBASIC3.21□□□□□ -1.9
CDH6P55285 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH6P55285 SNORD67-201ENST00000390833 111 ntBASIC3.21□□□□□ -1.9
CDH6P55285 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH6P55285 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 AC009237.2-201ENST00000421358 284 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AL606495.1-201ENST00000422100 813 ntBASIC3.21□□□□□ -1.9
CDH6P55285 TRIM60P18-201ENST00000441518 828 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AC093392.2-201ENST00000450682 337 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AL353718.1-201ENST00000451028 517 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH6P55285 GTF2IP12-201ENST00000456547 356 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH6P55285 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH6P55285 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH6P55285 RPS4XP6-201ENST00000477670 797 ntBASIC3.21□□□□□ -1.9
CDH6P55285 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH6P55285 PRELID3BP4-201ENST00000515476 571 ntBASIC3.21□□□□□ -1.9
CDH6P55285 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH6P55285 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
CDH6P55285 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH6P55285 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH6P55285 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH6P55285 MIR5004-201ENST00000579078 107 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH6P55285 AC004832.5-201ENST00000608677 401 ntBASIC3.21□□□□□ -1.9
CDH6P55285 AL159169.3-201ENST00000608871 561 ntBASIC3.21□□□□□ -1.9
CDH6P55285 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 AC004777.1-201ENST00000624317 287 ntBASIC3.21□□□□□ -1.9
CDH6P55285 HPVC1-201ENST00000629899 1198 ntBASIC3.21□□□□□ -1.9
CDH6P55285 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDH6P55285 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH6P55285 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH6P55285 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH6P55285 MIR16-2-201ENST00000362117 81 ntBASIC3.2□□□□□ -1.9
CDH6P55285 RNA5SP258-201ENST00000362750 119 ntBASIC3.2□□□□□ -1.9
CDH6P55285 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDH6P55285 AL445183.3-201ENST00000414168 502 ntBASIC3.2□□□□□ -1.9
CDH6P55285 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH6P55285 MTCO3P12-201ENST00000416718 547 ntBASIC3.2□□□□□ -1.9
CDH6P55285 AL451062.2-201ENST00000427515 271 ntBASIC3.2□□□□□ -1.9
CDH6P55285 HSFY3P-201ENST00000444242 1191 ntBASIC3.2□□□□□ -1.9
CDH6P55285 AC016696.1-201ENST00000446949 318 ntBASIC3.2□□□□□ -1.9
CDH6P55285 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH6P55285 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
CDH6P55285 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH6P55285 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH6P55285 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDH6P55285 SLC25A15P5-201ENST00000508033 253 ntBASIC3.2□□□□□ -1.9
CDH6P55285 RNU1-61P-201ENST00000516107 151 ntBASIC3.2□□□□□ -1.9
CDH6P55285 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
CDH6P55285 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH6P55285 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH6P55285 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH6P55285 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.2□□□□□ -1.9
CDH6P55285 AC098679.5-201ENST00000624394 571 ntBASIC3.2□□□□□ -1.9
CDH6P55285 AC106730.3-201ENST00000624568 641 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms