Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COPB1P53618 GDI2P1-201ENST00000429312 1336 ntBASIC4.42□□□□□ -1.7
COPB1P53618 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COPB1P53618 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
COPB1P53618 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.41□□□□□ -1.7
COPB1P53618 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.41□□□□□ -1.7
COPB1P53618 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 RNA5SP502-201ENST00000362694 119 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RNU1-89P-201ENST00000384592 164 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RN7SKP56-201ENST00000410513 331 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RN7SKP27-201ENST00000410684 333 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RN7SKP33-201ENST00000410942 340 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RN7SKP263-201ENST00000411194 309 ntBASIC4.41□□□□□ -1.7
COPB1P53618 HMGB1P11-201ENST00000413899 637 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC083875.1-201ENST00000419509 405 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AL592293.2-201ENST00000422292 996 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC234779.1-201ENST00000425910 285 ntBASIC4.41□□□□□ -1.7
COPB1P53618 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 AC104651.1-201ENST00000427559 735 ntBASIC4.41□□□□□ -1.7
COPB1P53618 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.41□□□□□ -1.7
COPB1P53618 AC004975.1-201ENST00000428733 208 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.41□□□□□ -1.7
COPB1P53618 AC092013.1-201ENST00000438795 332 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AL831737.1-201ENST00000441288 271 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RPS4XP4-201ENST00000443195 763 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.41□□□□□ -1.7
COPB1P53618 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.41□□□□□ -1.7
COPB1P53618 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.41□□□□□ -1.7
COPB1P53618 AC133473.1-201ENST00000455173 299 ntBASIC4.41□□□□□ -1.7
COPB1P53618 OR9M1P-201ENST00000459641 921 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC092757.1-201ENST00000467293 467 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC011276.1-201ENST00000469688 323 ntBASIC4.41□□□□□ -1.7
COPB1P53618 RPL7P24-201ENST00000493052 752 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.41□□□□□ -1.7
COPB1P53618 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COPB1P53618 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.41□□□□□ -1.7
COPB1P53618 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.41□□□□□ -1.7
COPB1P53618 AC026726.1-201ENST00000512859 601 ntBASIC4.41□□□□□ -1.7
COPB1P53618 FABP5P5-201ENST00000515537 406 ntBASIC4.41□□□□□ -1.7
COPB1P53618 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 AC134698.4-201ENST00000523451 826 ntBASIC4.41□□□□□ -1.7
COPB1P53618 OR5G4P-201ENST00000525251 760 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 AP003392.2-201ENST00000527269 208 ntBASIC4.41□□□□□ -1.7
COPB1P53618 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 AC141257.3-201ENST00000572906 215 ntBASIC4.41□□□□□ -1.7
COPB1P53618 MIR4801-201ENST00000582704 82 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.41□□□□□ -1.7
COPB1P53618 AC123786.2-201ENST00000603459 275 ntBASIC4.41□□□□□ -1.7
COPB1P53618 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC123768.4-201ENST00000616244 701 ntBASIC4.41□□□□□ -1.7
COPB1P53618 AC138932.5-201ENST00000617759 563 ntBASIC4.41□□□□□ -1.7
COPB1P53618 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.41□□□□□ -1.7
COPB1P53618 AL603839.4-201ENST00000624658 1005 ntBASIC4.41□□□□□ -1.7
COPB1P53618 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.41□□□□□ -1.7
COPB1P53618 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
COPB1P53618 UBE3AP2-201ENST00000429033 2259 ntBASIC4.41□□□□□ -1.7
COPB1P53618 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
COPB1P53618 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COPB1P53618 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COPB1P53618 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.4□□□□□ -1.7
COPB1P53618 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
COPB1P53618 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
COPB1P53618 RNU6-441P-201ENST00000384545 106 ntBASIC4.4□□□□□ -1.71
COPB1P53618 OR6C69P-201ENST00000394268 893 ntBASIC4.4□□□□□ -1.71
COPB1P53618 HMGB1P17-201ENST00000403495 628 ntBASIC4.4□□□□□ -1.71
COPB1P53618 MIR1251-201ENST00000408552 70 ntBASIC4.4□□□□□ -1.71
COPB1P53618 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.4□□□□□ -1.71
COPB1P53618 RPL7P30-201ENST00000420888 709 ntBASIC4.4□□□□□ -1.71
COPB1P53618 RPS27AP14-201ENST00000422868 454 ntBASIC4.4□□□□□ -1.71
COPB1P53618 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.4□□□□□ -1.71
COPB1P53618 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.4□□□□□ -1.71
COPB1P53618 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COPB1P53618 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.4□□□□□ -1.71
COPB1P53618 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 VN1R10P-201ENST00000447106 875 ntBASIC4.4□□□□□ -1.71
COPB1P53618 NPM1P49-201ENST00000448027 714 ntBASIC4.4□□□□□ -1.71
COPB1P53618 MTCO1P27-201ENST00000448269 226 ntBASIC4.4□□□□□ -1.71
COPB1P53618 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 MEMO1P3-201ENST00000459811 302 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC010618.1-201ENST00000469924 477 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 PRELID3BP7-201ENST00000503606 469 ntBASIC4.4□□□□□ -1.71
COPB1P53618 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.4□□□□□ -1.71
COPB1P53618 AC108475.1-201ENST00000507880 950 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms