Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 HSPE1P3-201ENST00000559254 309 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AL512347.1-201ENST00000566420 503 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN3P51790 MIR4637-201ENST00000582405 84 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AL159169.3-201ENST00000608871 561 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 AC072039.2-201ENST00000608883 439 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 VIS1.1-201ENST00000610517 203 ntBASIC4.08□□□□□ -1.76
CLCN3P51790 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLCN3P51790 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN3P51790 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN3P51790 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN3P51790 SGO1P2-201ENST00000429458 1589 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN3P51790 GDI2P1-201ENST00000429312 1336 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 SNORD46.1-201ENST00000364139 104 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 SNORD116-9-201ENST00000384000 95 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 SNORD116-3-201ENST00000384287 95 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 SNORD116-7-201ENST00000384404 95 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 SNORD116-5-201ENST00000384462 95 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 MIR7-3-201ENST00000384898 110 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 MIR153-1-201ENST00000384914 90 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 HMGB1P17-201ENST00000403495 628 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 CRYBB2P1-203ENST00000415709 538 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 OFD1P18Y-201ENST00000420889 959 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC011233.1-201ENST00000422812 283 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 OR51AB1P-201ENST00000429046 620 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 RPS25P9-201ENST00000435591 252 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 ISCA1P2-201ENST00000438679 421 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 AL109741.2-201ENST00000455561 343 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 RPL7P49-201ENST00000471402 708 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
CLCN3P51790 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC139783.2-201ENST00000504847 1145 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 TMEM248P1-201ENST00000510579 951 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.07□□□□□ -1.76
CLCN3P51790 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 DEFB109D-201ENST00000529497 240 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCN3P51790 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC006960.3-201ENST00000561845 705 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC068790.2-201ENST00000602601 557 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 YWHAQP7-201ENST00000603536 658 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 RNA5SP108-201ENST00000605921 117 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC006270.3-201ENST00000605967 1036 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 U3.45-201ENST00000607547 219 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC011939.3-201ENST00000613686 466 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCN3P51790 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN3P51790 AP000553.6-201ENST00000641242 118 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN3P51790 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLCN3P51790 AC074029.4-201ENST00000624796 1859 ntBASIC4.07□□□□□ -1.76
CLCN3P51790 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCN3P51790 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCN3P51790 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCN3P51790 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN3P51790 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLCN3P51790 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCN3P51790 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLCN3P51790 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLCN3P51790 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CLCN3P51790 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLCN3P51790 SNORD9-201ENST00000362566 104 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 RNA5SP387-201ENST00000364226 106 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCN3P51790 RNU6-356P-201ENST00000384140 107 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCN3P51790 HLFP1-201ENST00000402375 499 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 AC245052.5-201ENST00000416320 649 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 MTND4P20-201ENST00000424125 869 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCN3P51790 AL593851.1-201ENST00000426171 157 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCN3P51790 MTCO3P5-201ENST00000433620 714 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCN3P51790 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCN3P51790 AC118469.1-201ENST00000442943 488 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 MTCYBP3-201ENST00000445588 1137 ntBASIC4.06□□□□□ -1.76
CLCN3P51790 AC006480.1-201ENST00000449887 378 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms