Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR4270-201ENST00000581799 70 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 SNORD84-203ENST00000584275 78 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 BBIP1P1-201ENST00000602999 279 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AP001981.2-201ENST00000603241 418 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 FAM25E-202ENST00000608562 189 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC095050.2-201ENST00000510748 1458 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC092447.10-201ENST00000620607 1652 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-1P43699 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-1P43699 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-1P43699 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NKX2-1P43699 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC007685.1-201ENST00000329806 452 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 Y_RNA.51-201ENST00000362725 102 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 SNORA51.2-201ENST00000364595 132 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 SNORD116-4-201ENST00000384733 96 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NKX2-1P43699 RPL7P8-201ENST00000411964 730 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC093698.1-201ENST00000423843 571 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AL360081.1-201ENST00000428299 555 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC002381.1-201ENST00000447049 280 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 RPL7P52-201ENST00000449200 742 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 MTCO3P16-201ENST00000454456 754 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 BX322784.1-201ENST00000455793 1077 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AC010326.1-201ENST00000462726 602 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC021678.1-201ENST00000505195 936 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC022447.3-201ENST00000506865 495 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-1P43699 RNU6-1095P-201ENST00000516148 108 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-1P43699 MED28P5-201ENST00000528254 438 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC024224.1-201ENST00000538284 609 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AC007115.1-201ENST00000546853 234 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-1P43699 ROCK1P1-201ENST00000573767 549 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 RN7SL690P-201ENST00000582087 240 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-1P43699 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 AL354984.3-201ENST00000604803 325 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 AC004853.1-201ENST00000604902 698 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 USP8P1-201ENST00000494673 3183 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-1P43699 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NKX2-1P43699 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
NKX2-1P43699 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX2-1P43699 MTND4P4-201ENST00000439033 1366 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-1P43699 IPO8P1-201ENST00000455509 3109 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 NCAPGP1-201ENST00000505112 1814 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RNY4P24-201ENST00000362735 96 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RN7SKP103-201ENST00000363848 320 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RNU6-501P-201ENST00000364072 100 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 Y_RNA.318-201ENST00000365131 97 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 SNORA26.8-201ENST00000391306 124 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC127526.1-201ENST00000417526 366 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AL139095.3-201ENST00000419672 1203 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX2-1P43699 CYCSP46-201ENST00000423569 204 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC010153.1-201ENST00000432862 727 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RPL7P28-201ENST00000437739 740 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX2-1P43699 BMI1P1-201ENST00000445879 941 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 Z82190.1-201ENST00000454534 490 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RPL36AP13-201ENST00000457490 317 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 snoU13.8-201ENST00000458890 104 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms