Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFSF9P41273 MIR4513-201ENST00000581077 86 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 MIR4298-201ENST00000584380 73 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AC090425.2-201ENST00000608818 501 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AC096586.1-201ENST00000610267 561 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AL118508.4-201ENST00000624142 1176 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AC068620.4-201ENST00000636730 1182 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFSF9P41273 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TNFSF9P41273 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF9P41273 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF9P41273 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF9P41273 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF9P41273 AP001350.1-201ENST00000601906 1524 ntBASIC3.14□□□□□ -1.91
TNFSF9P41273 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFSF9P41273 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF9P41273 RNU6-1226P-201ENST00000384317 107 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 Y_RNA.493-201ENST00000384422 102 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 RNU6-1151P-201ENST00000384684 107 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AP000567.1-201ENST00000406413 156 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 UBE2V1P9-201ENST00000414760 368 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFSF9P41273 RSL24D1P8-201ENST00000434442 492 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC092170.1-201ENST00000440211 356 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 BX248409.1-201ENST00000455497 255 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFSF9P41273 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC083906.5-201ENST00000503722 328 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 HIGD1AP13-201ENST00000509878 289 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 TXNP6-201ENST00000510190 310 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC026801.2-201ENST00000515352 425 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 HIGD1AP10-201ENST00000527837 282 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFSF9P41273 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC021851.1-201ENST00000608537 1082 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC006023.2-201ENST00000609916 167 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AL590240.3-201ENST00000621416 943 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 PLCE1P1-201ENST00000622094 305 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC007998.5-201ENST00000622938 237 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 AC009039.2-201ENST00000624524 529 ntBASIC3.13□□□□□ -1.91
TNFSF9P41273 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFSF9P41273 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFSF9P41273 AC118273.1-201ENST00000525324 3006 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF9P41273 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 RNU6-444P-201ENST00000383988 108 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 RNU6-1181P-201ENST00000384191 106 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF9P41273 RNU2-71P-201ENST00000411395 189 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 AL158825.1-201ENST00000414735 521 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFSF9P41273 RNFT1P2-201ENST00000443064 757 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 AC112653.1-201ENST00000443851 386 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 ELOCP13-201ENST00000443934 329 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF9P41273 HMGN2P16-201ENST00000456802 261 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AC109635.4-202ENST00000531666 412 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AC092470.1-201ENST00000546187 132 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AC113368.1-201ENST00000603736 382 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 AC012467.1-201ENST00000607740 256 ntBASIC3.12□□□□□ -1.91
TNFSF9P41273 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF9P41273 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF9P41273 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
TNFSF9P41273 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFSF9P41273 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFSF9P41273 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TNFSF9P41273 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
TNFSF9P41273 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TNFSF9P41273 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 ARF4P3-201ENST00000397387 509 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms