Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC1P41238 RPL37P21-201ENST00000435890 276 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 MTCO2P16-201ENST00000436962 677 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBEC1P41238 RPS4XP4-201ENST00000443195 763 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC1P41238 RPL7P52-201ENST00000449200 742 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC1P41238 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AC023424.2-201ENST00000493479 777 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AC139783.2-201ENST00000504847 1145 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 RN7SKP122-201ENST00000515923 296 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 RNU6-27P-201ENST00000516146 107 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 Y_RNA.695-201ENST00000516715 107 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBEC1P41238 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.69□□□□□ -1.82
APOBEC1P41238 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AC007599.1-201ENST00000568688 1174 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC1P41238 RN7SL600P-201ENST00000581811 299 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 MIR544B-201ENST00000582372 78 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AL353997.4-201ENST00000586196 166 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 IGHV3-29-201ENST00000604817 344 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC1P41238 AL391497.1-201ENST00000608671 547 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AC023043.4-201ENST00000612081 449 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 RMST_9.1-201ENST00000619945 193 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AL136964.1-201ENST00000622038 2990 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 AC040168.1-201ENST00000623594 991 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 CR381572.1-201ENST00000625098 102 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 MIR492-201ENST00000638676 116 ntBASIC3.69□□□□□ -1.82
APOBEC1P41238 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
APOBEC1P41238 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBEC1P41238 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC1P41238 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBEC1P41238 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBEC1P41238 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBEC1P41238 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
APOBEC1P41238 AC126755.2-208ENST00000327792 462 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC138969.1-213ENST00000331436 462 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 RNU6-989P-201ENST00000362756 107 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 Y_RNA.201-201ENST00000364052 96 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 SNORA70C-201ENST00000384538 135 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 RNU11-4P-201ENST00000391149 133 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 HSPE1P12-201ENST00000412576 301 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBEC1P41238 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC1P41238 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBEC1P41238 TRIM60P18-201ENST00000441518 828 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC1P41238 OR6K1P-201ENST00000456766 971 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 snoU13.8-201ENST00000458890 104 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 SNORD108-201ENST00000459332 71 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 RPS4XP10-201ENST00000465034 731 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC068724.1-201ENST00000487100 792 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AP001025.2-201ENST00000490908 477 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 COX7A2P2-201ENST00000505291 250 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC025554.1-201ENST00000505641 188 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBEC1P41238 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
APOBEC1P41238 OR4P1P-201ENST00000530808 1136 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC023161.2-201ENST00000551218 780 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 EEF1B2P4-201ENST00000551398 348 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBEC1P41238 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.68□□□□□ -1.82
APOBEC1P41238 AC068790.5-201ENST00000602741 355 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AP001981.2-201ENST00000603241 418 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBEC1P41238 AL596245.1-201ENST00000618994 362 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 MIR4727-201ENST00000622232 55 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AL356121.2-201ENST00000624715 780 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC091925.2-201ENST00000625059 256 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AC068137.4-201ENST00000638485 296 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 AL356489.2-201ENST00000566968 3528 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 DCAF13P1-201ENST00000495256 1330 ntBASIC3.68□□□□□ -1.82
APOBEC1P41238 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBEC1P41238 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBEC1P41238 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC1P41238 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC1P41238 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
APOBEC1P41238 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC1P41238 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC1P41238 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC1P41238 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC1P41238 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC1P41238 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC1P41238 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.67□□□□□ -1.82
APOBEC1P41238 RPL32P3-201ENST00000359025 275 ntBASIC3.67□□□□□ -1.82
APOBEC1P41238 U3.4-201ENST00000363352 213 ntBASIC3.67□□□□□ -1.82
APOBEC1P41238 RNU6-263P-201ENST00000363811 107 ntBASIC3.67□□□□□ -1.82
APOBEC1P41238 RNU6-744P-201ENST00000365557 107 ntBASIC3.67□□□□□ -1.82
APOBEC1P41238 RNU6-1316P-201ENST00000384242 108 ntBASIC3.67□□□□□ -1.82
APOBEC1P41238 SNORD51-201ENST00000384320 80 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms