Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL079343.1-201ENST00000572358 1771 ntBASIC3.46□□□□□ -1.86
SOX3P41225 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.46□□□□□ -1.86
SOX3P41225 AC073073.2-201ENST00000609827 2578 ntBASIC3.46□□□□□ -1.86
SOX3P41225 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SOX3P41225 AL391994.1-201ENST00000254724 282 ntBASIC3.46□□□□□ -1.86
SOX3P41225 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SOX3P41225 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SOX3P41225 MIR23B-201ENST00000384832 97 ntBASIC3.46□□□□□ -1.86
SOX3P41225 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.46□□□□□ -1.86
SOX3P41225 AC007066.1-201ENST00000392902 381 ntBASIC3.46□□□□□ -1.86
SOX3P41225 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 AL391417.1-201ENST00000404100 426 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX3P41225 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC098592.1-201ENST00000419352 333 ntBASIC3.46□□□□□ -1.86
SOX3P41225 PTP4A1P5-201ENST00000420305 455 ntBASIC3.46□□□□□ -1.86
SOX3P41225 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.46□□□□□ -1.86
SOX3P41225 MTND5P2-201ENST00000442927 1142 ntBASIC3.46□□□□□ -1.86
SOX3P41225 MTCYBP3-201ENST00000445588 1137 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 UBDP1-202ENST00000457888 382 ntBASIC3.46□□□□□ -1.86
SOX3P41225 RPS3AP22-201ENST00000488297 769 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.46□□□□□ -1.86
SOX3P41225 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX3P41225 HMGN1P11-201ENST00000508668 303 ntBASIC3.46□□□□□ -1.86
SOX3P41225 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 MRPS33P3-201ENST00000513456 322 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 PAICSP4-201ENST00000517543 1253 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX3P41225 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 UBE2NP1-201ENST00000545592 458 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC008127.2-201ENST00000549925 1075 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX3P41225 MIR4637-201ENST00000582405 84 ntBASIC3.46□□□□□ -1.86
SOX3P41225 OR4G1P-201ENST00000588632 938 ntBASIC3.46□□□□□ -1.86
SOX3P41225 VN1R79P-201ENST00000593540 513 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC244505.7-201ENST00000599675 272 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.46□□□□□ -1.86
SOX3P41225 AC106791.2-201ENST00000604680 391 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AL137849.1-201ENST00000604767 169 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX3P41225 AC243773.3-201ENST00000613270 256 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AL136981.2-201ENST00000617319 734 ntBASIC3.46□□□□□ -1.86
SOX3P41225 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 AC022079.1-201ENST00000621546 602 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC068057.2-201ENST00000624047 895 ntBASIC3.46□□□□□ -1.86
SOX3P41225 AC004943.3-201ENST00000624116 600 ntBASIC3.46□□□□□ -1.86
SOX3P41225 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SOX3P41225 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX3P41225 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX3P41225 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX3P41225 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX3P41225 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SOX3P41225 AC106871.1-201ENST00000568324 3102 ntBASIC3.45□□□□□ -1.86
SOX3P41225 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.45□□□□□ -1.86
SOX3P41225 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.45□□□□□ -1.86
SOX3P41225 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX3P41225 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SOX3P41225 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX3P41225 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SOX3P41225 RNU6-1200P-201ENST00000384162 107 ntBASIC3.45□□□□□ -1.86
SOX3P41225 MIR200C-201ENST00000384980 68 ntBASIC3.45□□□□□ -1.86
SOX3P41225 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SOX3P41225 SOD2P1-201ENST00000396543 562 ntBASIC3.45□□□□□ -1.86
SOX3P41225 AC016769.3-201ENST00000396562 315 ntBASIC3.45□□□□□ -1.86
SOX3P41225 RPL23AP29-201ENST00000397284 453 ntBASIC3.45□□□□□ -1.86
SOX3P41225 RPL21P17-201ENST00000397467 475 ntBASIC3.45□□□□□ -1.86
SOX3P41225 AL024474.1-201ENST00000404655 591 ntBASIC3.45□□□□□ -1.86
SOX3P41225 RN7SKP177-201ENST00000410567 355 ntBASIC3.45□□□□□ -1.86
SOX3P41225 MTCYBP38-201ENST00000417160 1123 ntBASIC3.45□□□□□ -1.86
SOX3P41225 AC127526.1-201ENST00000417526 366 ntBASIC3.45□□□□□ -1.86
SOX3P41225 OR51AB1P-201ENST00000429046 620 ntBASIC3.45□□□□□ -1.86
SOX3P41225 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.45□□□□□ -1.86
SOX3P41225 AL133217.1-201ENST00000450980 425 ntBASIC3.45□□□□□ -1.86
SOX3P41225 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.45□□□□□ -1.86
SOX3P41225 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.45□□□□□ -1.86
SOX3P41225 ART2BP-201ENST00000453501 499 ntBASIC3.45□□□□□ -1.86
SOX3P41225 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.45□□□□□ -1.86
SOX3P41225 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.45□□□□□ -1.86
SOX3P41225 RPL7P15-201ENST00000461190 712 ntBASIC3.45□□□□□ -1.86
SOX3P41225 PABPC1P3-201ENST00000469174 459 ntBASIC3.45□□□□□ -1.86
SOX3P41225 AC022034.3-201ENST00000471393 478 ntBASIC3.45□□□□□ -1.86
SOX3P41225 RPL21P103-201ENST00000479921 488 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms