Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 RNA5SP39-201ENST00000411245 120 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 MTCO2P21-201ENST00000419780 677 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL035423.1-201ENST00000420331 213 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC005005.2-201ENST00000420779 380 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 BX119904.4-201ENST00000424402 301 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AP000907.1-201ENST00000428428 510 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC13P31276 GTF2IP3-201ENST00000433887 494 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 MTND4P6-201ENST00000438297 472 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL451050.1-201ENST00000450126 415 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC13P31276 NECAP1P2-201ENST00000455668 727 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 RPS20P24-201ENST00000457473 361 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 RPL7P15-201ENST00000461190 712 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL136126.1-201ENST00000473603 402 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 RN7SL293P-201ENST00000481765 281 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC13P31276 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 KLRA1P-201ENST00000503499 986 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 MTND4P2-201ENST00000507767 1203 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
HOXC13P31276 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC13P31276 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC090877.1-201ENST00000561418 344 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC037471.2-201ENST00000564941 598 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC024060.1-201ENST00000607052 494 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC245008.1-201ENST00000608123 476 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC005332.10-201ENST00000612725 619 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC022306.2-201ENST00000617563 647 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL355493.4-201ENST00000618530 292 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AL590240.3-201ENST00000621416 943 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 MIR4727-201ENST00000622232 55 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC098679.4-201ENST00000624241 654 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC13P31276 AC119674.1-207ENST00000641355 633 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 AC032011.1-201ENST00000611703 1549 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 MTND4P5-201ENST00000435821 1374 ntBASIC3.99□□□□□ -1.77
HOXC13P31276 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC13P31276 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC13P31276 AL390862.1-201ENST00000635467 1469 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 RNU6-707P-201ENST00000364647 95 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXC13P31276 RNU6-730P-201ENST00000383954 104 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 MIR490-201ENST00000384865 128 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 MIR34B-201ENST00000385076 84 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC13P31276 KRR1P1-201ENST00000419430 803 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 RPF2P1-201ENST00000424137 906 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 SDCBPP2-201ENST00000424643 885 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC093155.1-201ENST00000440164 826 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 PDSS1P2-201ENST00000449397 678 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC13P31276 SSXP4-201ENST00000451349 245 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 PTGES3P5-201ENST00000455109 434 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC084198.1-201ENST00000477747 402 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC012181.1-201ENST00000479895 423 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC013828.1-201ENST00000481845 158 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 RPL23AP44-201ENST00000482216 473 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC026427.2-201ENST00000506228 536 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC109458.1-201ENST00000508858 316 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC13P31276 SNORA48.10-201ENST00000516965 160 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC13P31276 RPL12P22-201ENST00000519073 490 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 UBTFL10-201ENST00000528532 562 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 OR4A12P-201ENST00000530847 918 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC090502.2-201ENST00000549267 280 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXC13P31276 SULT1C2P1-202ENST00000562418 459 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms