Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.75□□□□□ -1.81
MSH3P20585 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.75□□□□□ -1.81
MSH3P20585 AC118469.1-201ENST00000442943 488 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.75□□□□□ -1.81
MSH3P20585 MTND2P4-201ENST00000445034 1004 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.75□□□□□ -1.81
MSH3P20585 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 MTCO1P48-201ENST00000448024 1096 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH3P20585 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.75□□□□□ -1.81
MSH3P20585 RPS27AP8-201ENST00000452665 445 ntBASIC3.75□□□□□ -1.81
MSH3P20585 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH3P20585 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 AC084198.1-201ENST00000477747 402 ntBASIC3.75□□□□□ -1.81
MSH3P20585 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH3P20585 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 AC112198.1-201ENST00000505369 1220 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AC093281.2-201ENST00000510153 597 ntBASIC3.75□□□□□ -1.81
MSH3P20585 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 RAC1P2-201ENST00000511164 579 ntBASIC3.75□□□□□ -1.81
MSH3P20585 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 AC093853.1-201ENST00000515689 483 ntBASIC3.75□□□□□ -1.81
MSH3P20585 RNU6-678P-201ENST00000516832 109 ntBASIC3.75□□□□□ -1.81
MSH3P20585 RN7SKP209-201ENST00000516888 304 ntBASIC3.75□□□□□ -1.81
MSH3P20585 RN7SKP234-201ENST00000517173 224 ntBASIC3.75□□□□□ -1.81
MSH3P20585 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.75□□□□□ -1.81
MSH3P20585 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 MTCO1P49-201ENST00000523429 802 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH3P20585 AC135279.1-201ENST00000543493 504 ntBASIC3.75□□□□□ -1.81
MSH3P20585 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.75□□□□□ -1.81
MSH3P20585 VN1R92P-201ENST00000598511 928 ntBASIC3.75□□□□□ -1.81
MSH3P20585 DUXAP11-201ENST00000603858 526 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AL137849.1-201ENST00000604767 169 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AC105129.3-201ENST00000605455 485 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AC105429.2-201ENST00000610567 517 ntBASIC3.75□□□□□ -1.81
MSH3P20585 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.75□□□□□ -1.81
MSH3P20585 AC091905.1-201ENST00000624400 311 ntBASIC3.75□□□□□ -1.81
MSH3P20585 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
MSH3P20585 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH3P20585 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH3P20585 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH3P20585 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH3P20585 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 AC011477.1-204ENST00000623416 1325 ntBASIC3.74□□□□□ -1.81
MSH3P20585 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
MSH3P20585 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH3P20585 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
MSH3P20585 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
MSH3P20585 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH3P20585 SNRPEP3-201ENST00000338402 276 ntBASIC3.74□□□□□ -1.81
MSH3P20585 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MSH3P20585 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MSH3P20585 RNU1-85P-201ENST00000364127 164 ntBASIC3.74□□□□□ -1.81
MSH3P20585 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 SNORD116-9-201ENST00000384000 95 ntBASIC3.74□□□□□ -1.81
MSH3P20585 SNORD116-3-201ENST00000384287 95 ntBASIC3.74□□□□□ -1.81
MSH3P20585 SNORD116-7-201ENST00000384404 95 ntBASIC3.74□□□□□ -1.81
MSH3P20585 SNORD116-5-201ENST00000384462 95 ntBASIC3.74□□□□□ -1.81
MSH3P20585 MIR649-201ENST00000384843 97 ntBASIC3.74□□□□□ -1.81
MSH3P20585 RPL23AP29-201ENST00000397284 453 ntBASIC3.74□□□□□ -1.81
MSH3P20585 RNU2-28P-201ENST00000410457 189 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 AL139247.1-201ENST00000422768 325 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AC019178.2-201ENST00000423595 505 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 OR4F13P-201ENST00000428478 931 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AL035407.1-201ENST00000429211 571 ntBASIC3.74□□□□□ -1.81
MSH3P20585 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 SNORA71B-202ENST00000439232 272 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 RPL26P28-201ENST00000451325 435 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.74□□□□□ -1.81
MSH3P20585 AC073387.1-201ENST00000453261 709 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 MTCO3P11-201ENST00000455103 774 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 OR4G11P-201ENST00000492842 939 ntBASIC3.74□□□□□ -1.81
MSH3P20585 MTCYBP17-201ENST00000503579 789 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 AC005178.1-201ENST00000508392 440 ntBASIC3.74□□□□□ -1.81
MSH3P20585 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH3P20585 LTV1P1-201ENST00000510683 1237 ntBASIC3.74□□□□□ -1.81
MSH3P20585 NDUFB4P9-201ENST00000511646 388 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 RNU6-583P-201ENST00000516012 92 ntBASIC3.74□□□□□ -1.81
MSH3P20585 SCARNA14-201ENST00000516903 136 ntBASIC3.74□□□□□ -1.81
MSH3P20585 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.74□□□□□ -1.81
MSH3P20585 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.74□□□□□ -1.81
MSH3P20585 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms