Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF4P18848 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.87□□□□□ -1.63
ATF4P18848 AC083904.1-201ENST00000487828 231 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC015524.1-201ENST00000491585 472 ntBASIC4.87□□□□□ -1.63
ATF4P18848 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF4P18848 AC078918.1-201ENST00000498515 228 ntBASIC4.87□□□□□ -1.63
ATF4P18848 CCDC34P1-201ENST00000507441 517 ntBASIC4.87□□□□□ -1.63
ATF4P18848 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF4P18848 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.87□□□□□ -1.63
ATF4P18848 AC112206.3-201ENST00000514578 389 ntBASIC4.87□□□□□ -1.63
ATF4P18848 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.87□□□□□ -1.63
ATF4P18848 AC005519.1-201ENST00000554490 601 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AL118558.2-201ENST00000556294 238 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC087477.6-201ENST00000559595 843 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC023968.1-201ENST00000560719 475 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.87□□□□□ -1.63
ATF4P18848 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.87□□□□□ -1.63
ATF4P18848 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.87□□□□□ -1.63
ATF4P18848 MIR5583-1-201ENST00000580941 59 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.87□□□□□ -1.63
ATF4P18848 MIR4795-201ENST00000584182 89 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC092747.3-201ENST00000603769 301 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AL121757.2-201ENST00000611223 313 ntBASIC4.87□□□□□ -1.63
ATF4P18848 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.87□□□□□ -1.63
ATF4P18848 U2.17-201ENST00000611454 95 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AL627230.1-201ENST00000613077 211 ntBASIC4.87□□□□□ -1.63
ATF4P18848 AC022400.9-201ENST00000623633 273 ntBASIC4.87□□□□□ -1.63
ATF4P18848 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.87□□□□□ -1.63
ATF4P18848 AC104964.3-201ENST00000606115 2860 ntBASIC4.87□□□□□ -1.63
ATF4P18848 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATF4P18848 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATF4P18848 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATF4P18848 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.87□□□□□ -1.63
ATF4P18848 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 OR4G2P-202ENST00000641004 1759 ntBASIC4.86□□□□□ -1.63
ATF4P18848 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 SNORD113-7-201ENST00000363762 77 ntBASIC4.86□□□□□ -1.63
ATF4P18848 U3.12-201ENST00000364498 214 ntBASIC4.86□□□□□ -1.63
ATF4P18848 RNA5SP140-201ENST00000364524 92 ntBASIC4.86□□□□□ -1.63
ATF4P18848 SNORA51.2-201ENST00000364595 132 ntBASIC4.86□□□□□ -1.63
ATF4P18848 Y_RNA.813-201ENST00000364639 102 ntBASIC4.86□□□□□ -1.63
ATF4P18848 RNA5SP167-201ENST00000365461 116 ntBASIC4.86□□□□□ -1.63
ATF4P18848 UBBP2-201ENST00000376781 231 ntBASIC4.86□□□□□ -1.63
ATF4P18848 MRPS6P2-201ENST00000381143 370 ntBASIC4.86□□□□□ -1.63
ATF4P18848 Y_RNA.414-201ENST00000384011 101 ntBASIC4.86□□□□□ -1.63
ATF4P18848 Y_RNA.509-201ENST00000384506 99 ntBASIC4.86□□□□□ -1.63
ATF4P18848 RNU6-1127P-201ENST00000384580 107 ntBASIC4.86□□□□□ -1.63
ATF4P18848 MIR433-201ENST00000384837 93 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AL583835.1-201ENST00000399570 407 ntBASIC4.86□□□□□ -1.63
ATF4P18848 HSPA8P15-201ENST00000401676 786 ntBASIC4.86□□□□□ -1.63
ATF4P18848 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 RPS20P15-201ENST00000412792 311 ntBASIC4.86□□□□□ -1.63
ATF4P18848 OR6E1P-201ENST00000414424 923 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC092809.3-201ENST00000415453 231 ntBASIC4.86□□□□□ -1.63
ATF4P18848 MRPS21P5-201ENST00000417885 231 ntBASIC4.86□□□□□ -1.63
ATF4P18848 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF4P18848 RPL27AP8-201ENST00000424277 446 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.86□□□□□ -1.63
ATF4P18848 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 RPS15AP27-201ENST00000449183 343 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AL645939.1-201ENST00000453429 797 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 AP001086.1-201ENST00000494882 321 ntBASIC4.86□□□□□ -1.63
ATF4P18848 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 NENFP3-201ENST00000503735 313 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 AC023141.12-201ENST00000512399 199 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 RNU6-189P-201ENST00000516120 101 ntBASIC4.86□□□□□ -1.63
ATF4P18848 SNORA31.8-201ENST00000516327 108 ntBASIC4.86□□□□□ -1.63
ATF4P18848 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF4P18848 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.86□□□□□ -1.63
ATF4P18848 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ATF4P18848 AC026464.5-201ENST00000562497 722 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 AC103710.3-201ENST00000608157 948 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AL008723.3-201ENST00000608926 449 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC108673.3-201ENST00000609183 335 ntBASIC4.86□□□□□ -1.63
ATF4P18848 Z82243.1-201ENST00000609432 473 ntBASIC4.86□□□□□ -1.63
ATF4P18848 MIR6780B-201ENST00000610307 79 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC104237.2-201ENST00000612456 443 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AC034102.8-201ENST00000615146 484 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF4P18848 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms