Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.22□□□□□ -1.57
SYN1P17600 AC138915.2-201ENST00000569776 97 ntBASIC5.22□□□□□ -1.57
SYN1P17600 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYN1P17600 MIR4660-201ENST00000583549 74 ntBASIC5.22□□□□□ -1.57
SYN1P17600 NRBF2P5-201ENST00000603087 788 ntBASIC5.22□□□□□ -1.57
SYN1P17600 AC245014.2-201ENST00000603689 287 ntBASIC5.22□□□□□ -1.57
SYN1P17600 AC016925.2-201ENST00000605108 242 ntBASIC5.22□□□□□ -1.57
SYN1P17600 AC246785.4-201ENST00000605374 287 ntBASIC5.22□□□□□ -1.57
SYN1P17600 AC012603.1-201ENST00000606424 528 ntBASIC5.22□□□□□ -1.57
SYN1P17600 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.22□□□□□ -1.57
SYN1P17600 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYN1P17600 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYN1P17600 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYN1P17600 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYN1P17600 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.22□□□□□ -1.57
SYN1P17600 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYN1P17600 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SYN1P17600 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SYN1P17600 PCAT14-202ENST00000627127 3935 ntBASIC5.21□□□□□ -1.57
SYN1P17600 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.21□□□□□ -1.58
SYN1P17600 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SYN1P17600 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 RNU5E-5P-201ENST00000365379 116 ntBASIC5.21□□□□□ -1.58
SYN1P17600 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.21□□□□□ -1.58
SYN1P17600 MIR1284-201ENST00000408337 120 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AL356583.2-201ENST00000426536 280 ntBASIC5.21□□□□□ -1.58
SYN1P17600 Z82205.1-201ENST00000428456 297 ntBASIC5.21□□□□□ -1.58
SYN1P17600 RPS26P40-201ENST00000435209 294 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.21□□□□□ -1.58
SYN1P17600 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SYN1P17600 AC004980.3-201ENST00000447046 365 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AL691482.1-201ENST00000453255 87 ntBASIC5.21□□□□□ -1.58
SYN1P17600 CECR9-201ENST00000453421 199 ntBASIC5.21□□□□□ -1.58
SYN1P17600 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AL163540.1-201ENST00000485382 386 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC010587.1-201ENST00000505809 469 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.21□□□□□ -1.58
SYN1P17600 AF131216.2-201ENST00000512316 564 ntBASIC5.21□□□□□ -1.58
SYN1P17600 RNU6-1281P-201ENST00000516223 105 ntBASIC5.21□□□□□ -1.58
SYN1P17600 RNU6-347P-201ENST00000516658 105 ntBASIC5.21□□□□□ -1.58
SYN1P17600 HSPA8P13-201ENST00000523715 472 ntBASIC5.21□□□□□ -1.58
SYN1P17600 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.21□□□□□ -1.58
SYN1P17600 AC018630.1-201ENST00000541376 925 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.21□□□□□ -1.58
SYN1P17600 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.21□□□□□ -1.58
SYN1P17600 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.21□□□□□ -1.58
SYN1P17600 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.21□□□□□ -1.58
SYN1P17600 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.21□□□□□ -1.58
SYN1P17600 SULT1C2P2-201ENST00000562517 294 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC137800.2-201ENST00000574375 120 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.21□□□□□ -1.58
SYN1P17600 AC018638.8-201ENST00000588755 281 ntBASIC5.21□□□□□ -1.58
SYN1P17600 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.21□□□□□ -1.58
SYN1P17600 AC113194.1-201ENST00000606037 500 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.21□□□□□ -1.58
SYN1P17600 AC008250.2-201ENST00000615261 205 ntBASIC5.21□□□□□ -1.58
SYN1P17600 TPTEP1-208ENST00000636884 213 ntBASIC5.21□□□□□ -1.58
SYN1P17600 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SYN1P17600 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.21□□□□□ -1.58
SYN1P17600 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYN1P17600 DCAF13P1-201ENST00000495256 1330 ntBASIC5.21□□□□□ -1.58
SYN1P17600 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.2□□□□□ -1.58
SYN1P17600 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.2□□□□□ -1.58
SYN1P17600 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.2□□□□□ -1.58
SYN1P17600 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.2□□□□□ -1.58
SYN1P17600 TRIM51GP-201ENST00000534741 1350 ntBASIC5.2□□□□□ -1.58
SYN1P17600 AC002525.1-201ENST00000624392 1622 ntBASIC5.2□□□□□ -1.58
SYN1P17600 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYN1P17600 OR52B1P-201ENST00000316506 909 ntBASIC5.2□□□□□ -1.58
SYN1P17600 RPL21P132-201ENST00000331267 462 ntBASIC5.2□□□□□ -1.58
SYN1P17600 RNU6-1085P-201ENST00000363576 107 ntBASIC5.2□□□□□ -1.58
SYN1P17600 RNU6-115P-201ENST00000364310 107 ntBASIC5.2□□□□□ -1.58
SYN1P17600 Y_RNA.307-201ENST00000365022 117 ntBASIC5.2□□□□□ -1.58
SYN1P17600 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SYN1P17600 RPL23AP26-201ENST00000412728 464 ntBASIC5.2□□□□□ -1.58
SYN1P17600 GSTM3P2-201ENST00000412746 530 ntBASIC5.2□□□□□ -1.58
SYN1P17600 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.2□□□□□ -1.58
SYN1P17600 AC092634.6-201ENST00000418558 192 ntBASIC5.2□□□□□ -1.58
SYN1P17600 AL645608.4-201ENST00000423619 154 ntBASIC5.2□□□□□ -1.58
SYN1P17600 COX6CP13-201ENST00000428703 226 ntBASIC5.2□□□□□ -1.58
SYN1P17600 RPL19P16-201ENST00000433839 588 ntBASIC5.2□□□□□ -1.58
SYN1P17600 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.2□□□□□ -1.58
SYN1P17600 RPL23AP83-201ENST00000434984 473 ntBASIC5.2□□□□□ -1.58
SYN1P17600 RPS3AP54-201ENST00000435535 734 ntBASIC5.2□□□□□ -1.58
SYN1P17600 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms