Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC106872.2-201ENST00000494303 480 ntBASIC3.82□□□□□ -1.8
CFTRP13569 FAM92A1P2-202ENST00000504766 877 ntBASIC3.82□□□□□ -1.8
CFTRP13569 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.82□□□□□ -1.8
CFTRP13569 AK6P1-201ENST00000540219 478 ntBASIC3.82□□□□□ -1.8
CFTRP13569 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.82□□□□□ -1.8
CFTRP13569 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.82□□□□□ -1.8
CFTRP13569 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.82□□□□□ -1.8
CFTRP13569 AC105137.2-201ENST00000569073 466 ntBASIC3.82□□□□□ -1.8
CFTRP13569 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.82□□□□□ -1.8
CFTRP13569 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.82□□□□□ -1.8
CFTRP13569 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CFTRP13569 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CFTRP13569 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CFTRP13569 RAD1P1-201ENST00000231383 813 ntBASIC3.81□□□□□ -1.8
CFTRP13569 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.81□□□□□ -1.8
CFTRP13569 AC098826.1-201ENST00000433943 471 ntBASIC3.81□□□□□ -1.8
CFTRP13569 AC132942.1-201ENST00000486753 483 ntBASIC3.81□□□□□ -1.8
CFTRP13569 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.81□□□□□ -1.8
CFTRP13569 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.81□□□□□ -1.8
CFTRP13569 AC010378.1-201ENST00000619270 362 ntBASIC3.81□□□□□ -1.8
CFTRP13569 AC093591.3-201ENST00000634516 308 ntBASIC3.81□□□□□ -1.8
CFTRP13569 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.81□□□□□ -1.8
CFTRP13569 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CFTRP13569 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CFTRP13569 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.8□□□□□ -1.8
CFTRP13569 RN7SKP210-201ENST00000459176 261 ntBASIC3.8□□□□□ -1.8
CFTRP13569 SCARNA17.1-201ENST00000516211 143 ntBASIC3.8□□□□□ -1.8
CFTRP13569 SCARNA17.2-201ENST00000516334 143 ntBASIC3.8□□□□□ -1.8
CFTRP13569 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.8□□□□□ -1.8
CFTRP13569 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.8□□□□□ -1.8
CFTRP13569 MIR4644-201ENST00000579929 84 ntBASIC3.8□□□□□ -1.8
CFTRP13569 SCARNA17.4-201ENST00000614296 143 ntBASIC3.8□□□□□ -1.8
CFTRP13569 AP006248.2-201ENST00000623309 592 ntBASIC3.8□□□□□ -1.8
CFTRP13569 AC010733.2-201ENST00000589496 5702 ntBASIC3.8□□□□□ -1.8
CFTRP13569 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CFTRP13569 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CFTRP13569 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.8□□□□□ -1.8
CFTRP13569 Y_RNA.164-201ENST00000363709 102 ntBASIC3.79□□□□□ -1.8
CFTRP13569 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
CFTRP13569 AL445646.1-201ENST00000431784 216 ntBASIC3.79□□□□□ -1.8
CFTRP13569 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.79□□□□□ -1.8
CFTRP13569 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.79□□□□□ -1.8
CFTRP13569 RNA5SP76-201ENST00000516277 87 ntBASIC3.79□□□□□ -1.8
CFTRP13569 AP003467.2-201ENST00000520175 319 ntBASIC3.79□□□□□ -1.8
CFTRP13569 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
CFTRP13569 DCAF13P3-201ENST00000561147 1334 ntBASIC3.79□□□□□ -1.8
CFTRP13569 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CFTRP13569 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.79□□□□□ -1.8
CFTRP13569 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CFTRP13569 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.79□□□□□ -1.8
CFTRP13569 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.79□□□□□ -1.8
CFTRP13569 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.79□□□□□ -1.8
CFTRP13569 AC011494.1-201ENST00000596454 237 ntBASIC3.79□□□□□ -1.8
CFTRP13569 AL137072.1-201ENST00000603444 466 ntBASIC3.79□□□□□ -1.8
CFTRP13569 AP001005.3-201ENST00000622049 129 ntBASIC3.79□□□□□ -1.8
CFTRP13569 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CFTRP13569 PHKBP1-201ENST00000450951 1951 ntBASIC3.78□□□□□ -1.8
CFTRP13569 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFTRP13569 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFTRP13569 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.78□□□□□ -1.8
CFTRP13569 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFTRP13569 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CFTRP13569 AC097714.1-201ENST00000511272 1647 ntBASIC3.78□□□□□ -1.8
CFTRP13569 MIR21-201ENST00000362134 72 ntBASIC3.78□□□□□ -1.8
CFTRP13569 SNORD88.1-201ENST00000408684 91 ntBASIC3.78□□□□□ -1.8
CFTRP13569 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.78□□□□□ -1.8
CFTRP13569 CCNHP1-201ENST00000513311 678 ntBASIC3.78□□□□□ -1.8
CFTRP13569 RNA5SP380-201ENST00000517190 98 ntBASIC3.78□□□□□ -1.8
CFTRP13569 HMGB1P41-201ENST00000520234 440 ntBASIC3.78□□□□□ -1.8
CFTRP13569 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.78□□□□□ -1.8
CFTRP13569 AL451074.6-201ENST00000608512 729 ntBASIC3.78□□□□□ -1.8
CFTRP13569 AC008432.1-201ENST00000615912 1320 ntBASIC3.78□□□□□ -1.8
CFTRP13569 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CFTRP13569 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.78□□□□□ -1.81
CFTRP13569 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CFTRP13569 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFTRP13569 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
CFTRP13569 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFTRP13569 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFTRP13569 AC090229.1-201ENST00000590983 1609 ntBASIC3.77□□□□□ -1.81
CFTRP13569 Y_RNA.140-201ENST00000363474 103 ntBASIC3.77□□□□□ -1.81
CFTRP13569 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
CFTRP13569 AL139156.1-201ENST00000412785 841 ntBASIC3.77□□□□□ -1.81
CFTRP13569 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.77□□□□□ -1.81
CFTRP13569 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFTRP13569 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.77□□□□□ -1.81
CFTRP13569 RPL9P33-201ENST00000484311 566 ntBASIC3.77□□□□□ -1.81
CFTRP13569 RNU6-964P-201ENST00000516524 69 ntBASIC3.77□□□□□ -1.81
CFTRP13569 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CFTRP13569 AC091515.1-201ENST00000548110 679 ntBASIC3.77□□□□□ -1.81
CFTRP13569 AC010198.2-201ENST00000550612 259 ntBASIC3.77□□□□□ -1.81
CFTRP13569 AC090695.1-201ENST00000561269 1222 ntBASIC3.77□□□□□ -1.81
CFTRP13569 AC245517.5-201ENST00000611529 162 ntBASIC3.77□□□□□ -1.81
CFTRP13569 AC025125.1-201ENST00000624743 1922 ntBASIC3.77□□□□□ -1.81
CFTRP13569 AC091152.2-201ENST00000591628 2569 ntBASIC3.77□□□□□ -1.81
CFTRP13569 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
CFTRP13569 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CFTRP13569 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.76□□□□□ -1.81
CFTRP13569 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CFTRP13569 SNORA11.4-201ENST00000408823 129 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms