Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBP04114 AC018690.1-201ENST00000608144 626 ntBASIC1.44□□□□□ -2.18
APOBP04114 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 AL359715.4-201ENST00000606629 1436 ntBASIC1.43□□□□□ -2.18
APOBP04114 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
APOBP04114 AL512633.1-201ENST00000399931 655 ntBASIC1.43□□□□□ -2.18
APOBP04114 RPS7P9-201ENST00000414704 586 ntBASIC1.43□□□□□ -2.18
APOBP04114 AC012498.1-201ENST00000424037 437 ntBASIC1.43□□□□□ -2.18
APOBP04114 AL590399.6-201ENST00000446396 307 ntBASIC1.43□□□□□ -2.18
APOBP04114 AC055855.1-201ENST00000489563 579 ntBASIC1.43□□□□□ -2.18
APOBP04114 RN7SKP43-201ENST00000516173 320 ntBASIC1.43□□□□□ -2.18
APOBP04114 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.43□□□□□ -2.18
APOBP04114 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
APOBP04114 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
APOBP04114 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
APOBP04114 SNORA67.3-201ENST00000384366 140 ntBASIC1.43□□□□□ -2.18
APOBP04114 MIR9-3-201ENST00000385084 90 ntBASIC1.43□□□□□ -2.18
APOBP04114 RNU2-6P-201ENST00000411404 190 ntBASIC1.43□□□□□ -2.18
APOBP04114 COX6CP2-201ENST00000444980 225 ntBASIC1.43□□□□□ -2.18
APOBP04114 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.43□□□□□ -2.18
APOBP04114 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.43□□□□□ -2.18
APOBP04114 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.43□□□□□ -2.18
APOBP04114 AC103710.1-201ENST00000610003 901 ntBASIC1.43□□□□□ -2.18
APOBP04114 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.43□□□□□ -2.18
APOBP04114 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.43□□□□□ -2.18
APOBP04114 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.43□□□□□ -2.18
APOBP04114 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
APOBP04114 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.43□□□□□ -2.18
APOBP04114 AC002524.1-201ENST00000411687 547 ntBASIC1.43□□□□□ -2.18
APOBP04114 HMGB3P23-201ENST00000414981 585 ntBASIC1.43□□□□□ -2.18
APOBP04114 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 RPL23AP42-201ENST00000471152 471 ntBASIC1.43□□□□□ -2.18
APOBP04114 LINC00888-204ENST00000487386 421 ntBASIC1.43□□□□□ -2.18
APOBP04114 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.43□□□□□ -2.18
APOBP04114 AC147055.1-201ENST00000509261 750 ntBASIC1.43□□□□□ -2.18
APOBP04114 Y_RNA.670-201ENST00000516255 105 ntBASIC1.43□□□□□ -2.18
APOBP04114 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 AL451074.6-201ENST00000608512 729 ntBASIC1.43□□□□□ -2.18
APOBP04114 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOBP04114 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.42□□□□□ -2.18
APOBP04114 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
APOBP04114 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
APOBP04114 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.42□□□□□ -2.18
APOBP04114 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.42□□□□□ -2.18
APOBP04114 USP9YP5-201ENST00000511770 630 ntBASIC1.42□□□□□ -2.18
APOBP04114 AL353684.1-201ENST00000622677 1120 ntBASIC1.42□□□□□ -2.18
APOBP04114 AC016542.2-201ENST00000624201 619 ntBASIC1.42□□□□□ -2.18
APOBP04114 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOBP04114 MIR137-201ENST00000385223 102 ntBASIC1.42□□□□□ -2.18
APOBP04114 IPMKP1-201ENST00000425988 855 ntBASIC1.42□□□□□ -2.18
APOBP04114 RPL23AP45-201ENST00000476406 468 ntBASIC1.42□□□□□ -2.18
APOBP04114 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.42□□□□□ -2.18
APOBP04114 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
APOBP04114 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOBP04114 RPL23AP84-201ENST00000571193 464 ntBASIC1.42□□□□□ -2.18
APOBP04114 AC110994.2-201ENST00000635481 492 ntBASIC1.42□□□□□ -2.18
APOBP04114 SCN1A-220ENST00000641603 12506 ntBASIC1.42□□□□□ -2.18
APOBP04114 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOBP04114 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
APOBP04114 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOBP04114 AC004866.2-201ENST00000438285 481 ntBASIC1.42□□□□□ -2.18
APOBP04114 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.42□□□□□ -2.18
APOBP04114 RPL21P71-201ENST00000465598 459 ntBASIC1.42□□□□□ -2.18
APOBP04114 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.42□□□□□ -2.18
APOBP04114 AL022099.1-201ENST00000604551 712 ntBASIC1.42□□□□□ -2.18
APOBP04114 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.42□□□□□ -2.18
APOBP04114 SNORA51.11-201ENST00000384442 131 ntBASIC1.42□□□□□ -2.18
APOBP04114 SPA17P1-201ENST00000416656 452 ntBASIC1.42□□□□□ -2.18
APOBP04114 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.42□□□□□ -2.18
APOBP04114 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.42□□□□□ -2.18
APOBP04114 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.42□□□□□ -2.18
APOBP04114 PDCD5P1-201ENST00000543528 309 ntBASIC1.42□□□□□ -2.18
APOBP04114 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
APOBP04114 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
APOBP04114 OR52B1P-201ENST00000316506 909 ntBASIC1.41□□□□□ -2.18
APOBP04114 RNU1-100P-201ENST00000365255 165 ntBASIC1.41□□□□□ -2.18
APOBP04114 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.41□□□□□ -2.18
APOBP04114 SNRPGP9-201ENST00000456025 225 ntBASIC1.41□□□□□ -2.18
APOBP04114 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.41□□□□□ -2.18
APOBP04114 RNA5SP200-201ENST00000516360 103 ntBASIC1.41□□□□□ -2.18
APOBP04114 HSPE1P18-201ENST00000517602 280 ntBASIC1.41□□□□□ -2.18
APOBP04114 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.41□□□□□ -2.18
APOBP04114 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
APOBP04114 AL020991.1-201ENST00000612314 373 ntBASIC1.41□□□□□ -2.18
APOBP04114 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
APOBP04114 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
APOBP04114 RAC1P3-201ENST00000416129 580 ntBASIC1.41□□□□□ -2.18
APOBP04114 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.41□□□□□ -2.18
APOBP04114 ELOCP13-201ENST00000443934 329 ntBASIC1.41□□□□□ -2.18
APOBP04114 AC007182.2-201ENST00000489251 402 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms