Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RANP3-201ENST00000530970 276 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 TRAV37-201ENST00000553906 342 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A1P02462 AL160237.3-201ENST00000604114 1013 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AC010378.1-201ENST00000619270 362 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AL356266.1-201ENST00000623311 483 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A1P02462 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A1P02462 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
COL4A1P02462 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.73□□□□□ -1.97
COL4A1P02462 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.73□□□□□ -1.97
COL4A1P02462 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL4A1P02462 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.73□□□□□ -1.97
COL4A1P02462 NIPA2P2-201ENST00000496376 1083 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 KATNBL1P4-201ENST00000503545 918 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A1P02462 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.73□□□□□ -1.97
COL4A1P02462 AC016252.1-201ENST00000609721 474 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 AC103710.1-201ENST00000610003 901 ntBASIC2.73□□□□□ -1.97
COL4A1P02462 SYT14P1-202ENST00000600441 1448 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL4A1P02462 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COL4A1P02462 RNA5SP99-201ENST00000364020 114 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 U8.8-201ENST00000365399 135 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
COL4A1P02462 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
COL4A1P02462 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.72□□□□□ -1.97
COL4A1P02462 AC093151.1-201ENST00000427711 313 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 PNPT1P2-201ENST00000456768 2050 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 CEACAMP4-201ENST00000457676 421 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 RPS4XP6-201ENST00000477670 797 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.72□□□□□ -1.97
COL4A1P02462 AL109741.3-201ENST00000561748 592 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.72□□□□□ -1.97
COL4A1P02462 AL451074.6-201ENST00000608512 729 ntBASIC2.72□□□□□ -1.97
COL4A1P02462 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
COL4A1P02462 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.71□□□□□ -1.98
COL4A1P02462 ZNF542P-204ENST00000482727 1305 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL4A1P02462 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 RN7SKP31-201ENST00000516354 278 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
COL4A1P02462 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.71□□□□□ -1.98
COL4A1P02462 AK6P1-201ENST00000540219 478 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 AC025281.1-201ENST00000567026 265 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 AL133412.1-201ENST00000380194 2992 ntBASIC2.71□□□□□ -1.98
COL4A1P02462 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
COL4A1P02462 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.71□□□□□ -1.98
COL4A1P02462 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A1P02462 RNA5SP88-201ENST00000365560 109 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.7□□□□□ -1.98
COL4A1P02462 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 ISCA1P6-201ENST00000427740 390 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 AC111000.5-201ENST00000506559 1178 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 RN7SKP244-201ENST00000516513 307 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.7□□□□□ -1.98
COL4A1P02462 AC021733.2-201ENST00000518830 497 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A1P02462 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A1P02462 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.7□□□□□ -1.98
COL4A1P02462 SNRPGP18-201ENST00000553000 214 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 VN1R79P-201ENST00000593540 513 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 AP001521.1-201ENST00000609150 300 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 AC009831.4-201ENST00000620744 325 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 AC103798.2-201ENST00000624292 632 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.7□□□□□ -1.98
COL4A1P02462 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COL4A1P02462 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A1P02462 GABPAP-201ENST00000419271 1356 ntBASIC2.7□□□□□ -1.98
COL4A1P02462 U8.13-201ENST00000390842 128 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 RNU6-482P-201ENST00000391068 107 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC009302.1-201ENST00000417147 390 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 PTP4A1P1-201ENST00000420539 515 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 BTG3P1-201ENST00000435859 716 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC092045.1-201ENST00000495716 1231 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.69□□□□□ -1.98
COL4A1P02462 SCARNA16.3-201ENST00000516595 184 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC090819.1-201ENST00000523800 1111 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 OR5BN1P-201ENST00000532955 829 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC018630.1-201ENST00000541376 925 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC006116.7-201ENST00000590141 756 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 TPMTP1-201ENST00000592307 737 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC023043.3-201ENST00000593113 385 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC017076.1-201ENST00000607613 578 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A1P02462 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A1P02462 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A1P02462 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A1P02462 MTND5P23-201ENST00000430812 1655 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A1P02462 SNORA80E-201ENST00000384744 137 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 ATP5F1P6-201ENST00000402768 767 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms