Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-954P-201ENST00000411355 107 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.72□□□□□ -1.81
COL2A1P02458 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.72□□□□□ -1.81
COL2A1P02458 MTND4LP11-201ENST00000422184 280 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 AL139132.1-201ENST00000431587 344 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AC013410.1-201ENST00000436223 1232 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 FGF7P5-201ENST00000441829 291 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC092754.2-201ENST00000463506 460 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.72□□□□□ -1.81
COL2A1P02458 RPS4XP6-201ENST00000477670 797 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 RNU6-759P-201ENST00000516740 103 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AC067904.2-201ENST00000517322 1283 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 IGLVIV-53-201ENST00000520107 367 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL2A1P02458 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC025918.2-201ENST00000558683 763 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 EIF5A2P1-201ENST00000564027 460 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AC141257.3-201ENST00000572906 215 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AC105129.3-201ENST00000605455 485 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AP000254.1-201ENST00000609934 520 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 VIS1.1-201ENST00000610517 203 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 ATP5A1P2-202ENST00000616464 443 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC006927.3-201ENST00000638789 384 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL2A1P02458 AL356473.1-201ENST00000406203 1408 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 SGO1P1-201ENST00000603525 1447 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL2A1P02458 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.71□□□□□ -1.82
COL2A1P02458 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL2A1P02458 AC027514.1-201ENST00000588561 1603 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AC087565.3-202ENST00000642085 1603 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL2A1P02458 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL2A1P02458 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
COL2A1P02458 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 MIR30E-201ENST00000362104 92 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 MCTS2P-201ENST00000394552 546 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 RAP1BP1-201ENST00000412709 553 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 RPL30P16-201ENST00000419341 429 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 AL139281.1-201ENST00000422120 335 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 MTCO1P43-201ENST00000431831 488 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AL392003.1-201ENST00000434394 243 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 MTND4P25-201ENST00000441039 533 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.71□□□□□ -1.82
COL2A1P02458 AL360221.1-201ENST00000445989 335 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 RPL31P3-201ENST00000458430 332 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 MTCO3P7-201ENST00000510008 774 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 NDUFB9P3-201ENST00000521269 501 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AL139174.1-201ENST00000531489 886 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL2A1P02458 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.71□□□□□ -1.82
COL2A1P02458 TGIF1P1-201ENST00000558095 802 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AC018552.3-201ENST00000567416 561 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AL139286.2-201ENST00000606838 396 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AP002360.4-201ENST00000606980 481 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AC007349.4-201ENST00000608114 532 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AL451049.1-201ENST00000608672 497 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AC069234.5-201ENST00000611056 416 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 AC022079.2-201ENST00000619739 566 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 AC099506.2-201ENST00000623074 221 ntBASIC3.71□□□□□ -1.82
COL2A1P02458 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.71□□□□□ -1.82
COL2A1P02458 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.71□□□□□ -1.82
COL2A1P02458 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
COL2A1P02458 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL2A1P02458 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
COL2A1P02458 RIOK3P1-201ENST00000418778 1528 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.7□□□□□ -1.82
COL2A1P02458 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL2A1P02458 Z86062.1-201ENST00000406773 777 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 RNA5SP31-201ENST00000411144 127 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 UBE2V1P9-201ENST00000414760 368 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 VN1R31P-201ENST00000417498 730 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 OR6K4P-201ENST00000423179 955 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 SETP5-201ENST00000437270 562 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AL008629.1-201ENST00000438615 184 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms