Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLPTM1O96005 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLPTM1O96005 AL121657.1-201ENST00000327215 531 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 SNORA70.2-201ENST00000364506 135 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLPTM1O96005 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLPTM1O96005 RNU6-921P-201ENST00000384361 107 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 RN7SKP182-201ENST00000410772 298 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 TIMM9P2-201ENST00000419324 266 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 COX6B1P7-201ENST00000430845 235 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC241584.1-201ENST00000438469 1241 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 RPL23AP46-201ENST00000438548 490 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 SLC31A1P1-201ENST00000451221 567 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 MRPS31P2-201ENST00000451581 518 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.63□□□□□ -1.83
CLPTM1O96005 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AF213884.1-201ENST00000488102 463 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC110792.2-201ENST00000510278 224 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.63□□□□□ -1.83
CLPTM1O96005 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLPTM1O96005 MRPL49P2-201ENST00000521066 465 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AP003730.1-201ENST00000524605 285 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLPTM1O96005 CENPUP2-201ENST00000555897 1186 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC090877.1-201ENST00000561418 344 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC011260.1-201ENST00000578420 472 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC010928.3-201ENST00000587712 541 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC090425.2-201ENST00000608818 501 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AP001521.1-201ENST00000609150 300 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AC139792.2-201ENST00000624218 587 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 AC092184.1-201ENST00000625042 715 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 XPOTP1-201ENST00000443317 2398 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.63□□□□□ -1.83
CLPTM1O96005 AL157700.1-201ENST00000561973 1432 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CLPTM1O96005 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.62□□□□□ -1.83
CLPTM1O96005 FAM91A3P-201ENST00000456826 2544 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 MTND5P24-201ENST00000438892 1767 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 RNU6-216P-201ENST00000363282 104 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 SNORD116-9-201ENST00000384000 95 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 SNORD116-3-201ENST00000384287 95 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 SNORD116-7-201ENST00000384404 95 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 SNORD116-5-201ENST00000384462 95 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 SEPT2P1-201ENST00000419651 180 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AC019178.2-201ENST00000423595 505 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.62□□□□□ -1.83
CLPTM1O96005 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AC023347.2-201ENST00000433994 462 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 RPL23AP35-201ENST00000451906 501 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 RPL18AP17-201ENST00000455326 198 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 AC092754.2-201ENST00000463506 460 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CLPTM1O96005 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CLPTM1O96005 RPL30P6-201ENST00000475925 342 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.62□□□□□ -1.83
CLPTM1O96005 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AC112198.1-201ENST00000505369 1220 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.62□□□□□ -1.83
CLPTM1O96005 LTV1P1-201ENST00000510683 1237 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 RNU4-60P-201ENST00000517239 135 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AL389895.1-201ENST00000554127 252 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.62□□□□□ -1.83
CLPTM1O96005 AC074051.3-201ENST00000570238 358 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLPTM1O96005 AL590229.1-201ENST00000603497 542 ntBASIC3.62□□□□□ -1.83
CLPTM1O96005 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms